Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0792

Experiment: Anaerobic, 1 nM Mo, 500 nM W sample1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, 1 nM Mo, 500 nM W sample1
864,277	+		Psest_0791	0.69	-0.5
864,277	+		Psest_0791	0.69	+0.4
864,277	+		Psest_0791	0.69	-0.7
864,277	+		Psest_0791	0.69	-0.1
864,277	+		Psest_0791	0.69	-0.3
864,277	+		Psest_0791	0.69	-0.6
864,277	+		Psest_0791	0.69	+0.4
864,278	-		Psest_0791	0.69	-0.1
864,278	-		Psest_0791	0.69	+0.2
864,289	+		Psest_0791	0.70	-1.3
864,475	+		Psest_0791	0.85	+0.7
864,475	+		Psest_0791	0.85	-0.2
864,634	+				+0.0
864,634	+				-0.1
864,638	+				-0.4
864,639	-				+0.1
864,639	-				+0.4
864,639	-				+0.3
864,639	-				+0.3
864,639	-				+0.0
864,775	+				-0.3
864,775	+				-0.4
864,776	-				-0.2
864,776	-				+0.4
864,776	-				+0.4
864,776	-				-0.3
864,776	-				-0.8
864,787	+				-1.0
864,787	+				-0.2
864,788	-				-0.6
864,896	+				-0.3
864,896	+				-0.6
864,896	+				+0.1
864,896	+				-0.4
864,896	+				+0.1
864,896	+				-1.6
864,897	-				-0.1
864,897	-				-1.7
864,897	-				-1.4
864,897	-				-0.7
864,897	-				-0.6
864,897	-				+0.6
864,925	+				-1.0
864,925	+				-1.1
864,925	+				-1.2
864,926	-				-1.1
864,990	-				-1.0
865,048	-				-0.7
865,117	-				-0.7
865,158	+		Psest_0792	0.10	+0.7
865,197	+		Psest_0792	0.12	-0.9
865,198	-		Psest_0792	0.12	-1.2
865,260	+		Psest_0792	0.15	-0.5
865,260	+		Psest_0792	0.15	+0.1
865,260	+		Psest_0792	0.15	-0.6
865,260	+		Psest_0792	0.15	-0.7
865,261	-		Psest_0792	0.15	+0.4
865,261	-		Psest_0792	0.15	-1.9
865,261	-		Psest_0792	0.15	-1.5
865,261	-		Psest_0792	0.15	-0.5
865,261	-		Psest_0792	0.15	-0.1
865,335	+		Psest_0792	0.18	-0.8
865,335	+		Psest_0792	0.18	-0.6
865,335	+		Psest_0792	0.18	-2.0
865,335	+		Psest_0792	0.18	-0.3
865,335	+		Psest_0792	0.18	-0.2
865,335	+		Psest_0792	0.18	-0.4
865,335	+		Psest_0792	0.18	-2.3
865,336	-		Psest_0792	0.18	-0.6
865,704	+		Psest_0792	0.35	-0.9
865,704	+		Psest_0792	0.35	-0.8
865,704	+		Psest_0792	0.35	+0.1
865,705	-		Psest_0792	0.35	-0.9
865,705	-		Psest_0792	0.35	-0.4
865,705	-		Psest_0792	0.35	-1.1
865,705	-		Psest_0792	0.35	+1.7
865,705	-		Psest_0792	0.35	-0.5
865,705	-		Psest_0792	0.35	-2.2
865,705	-		Psest_0792	0.35	-1.7
865,705	-		Psest_0792	0.35	-0.6
865,705	-		Psest_0792	0.35	-0.8
865,705	-		Psest_0792	0.35	+1.5
865,705	-		Psest_0792	0.35	-2.2
865,705	-		Psest_0792	0.35	-0.7
865,705	-		Psest_0792	0.35	-1.7
865,848	+		Psest_0792	0.42	-0.4
865,940	+		Psest_0792	0.46	-2.1
865,940	+		Psest_0792	0.46	-0.7
865,940	+		Psest_0792	0.46	-1.0
865,941	-		Psest_0792	0.46	+0.1
865,944	+		Psest_0792	0.46	-0.3
865,944	+		Psest_0792	0.46	-1.9
865,944	+		Psest_0792	0.46	-1.2
865,944	+		Psest_0792	0.46	-0.1
865,944	+		Psest_0792	0.46	-0.9
865,944	+		Psest_0792	0.46	-2.1
865,944	+		Psest_0792	0.46	+0.1
865,944	+		Psest_0792	0.46	+0.1
865,944	+		Psest_0792	0.46	-1.8
865,944	+		Psest_0792	0.46	-0.7
865,944	+		Psest_0792	0.46	-1.3
865,944	+		Psest_0792	0.46	+0.1
865,944	+		Psest_0792	0.46	-1.2
865,944	+		Psest_0792	0.46	-1.4
865,945	-		Psest_0792	0.46	-0.1
865,945	-		Psest_0792	0.46	-1.1
865,945	-		Psest_0792	0.46	+0.4
865,945	-		Psest_0792	0.46	-1.1
865,945	-		Psest_0792	0.46	-0.6
865,945	-		Psest_0792	0.46	+0.4
865,945	-		Psest_0792	0.46	-0.3
865,945	-		Psest_0792	0.46	-0.2
865,945	-		Psest_0792	0.46	-0.9
865,945	-		Psest_0792	0.46	-0.8
865,945	-		Psest_0792	0.46	-0.3
865,945	-		Psest_0792	0.46	-0.7
865,945	-		Psest_0792	0.46	-0.8
865,945	-		Psest_0792	0.46	-1.0
865,945	-		Psest_0792	0.46	-0.9
865,945	-		Psest_0792	0.46	-0.8
865,945	-		Psest_0792	0.46	-0.3
866,097	+		Psest_0792	0.53	-1.5
866,097	+		Psest_0792	0.53	-1.1
866,115	+		Psest_0792	0.54	-0.5
866,115	+		Psest_0792	0.54	-0.8
866,116	-		Psest_0792	0.54	-1.3
866,116	-		Psest_0792	0.54	-0.2
866,116	-		Psest_0792	0.54	-0.4
866,580	+		Psest_0792	0.75	-2.1
866,580	+		Psest_0792	0.75	-1.1
866,581	-		Psest_0792	0.76	-1.1
866,625	+		Psest_0792	0.78	-0.7
866,625	+		Psest_0792	0.78	-0.1
866,625	+		Psest_0792	0.78	-1.7
866,625	+		Psest_0792	0.78	-0.8
866,625	+		Psest_0792	0.78	+1.3
866,625	+		Psest_0792	0.78	-0.6
866,625	+		Psest_0792	0.78	+0.1
866,625	+		Psest_0792	0.78	-1.3
866,625	+		Psest_0792	0.78	-0.3
866,625	+		Psest_0792	0.78	-0.2
866,625	+		Psest_0792	0.78	-1.2
866,625	+		Psest_0792	0.78	-0.1
866,625	+		Psest_0792	0.78	-1.9
866,625	+		Psest_0792	0.78	-0.6
866,625	+		Psest_0792	0.78	-0.1
866,626	-		Psest_0792	0.78	-0.7
866,626	-		Psest_0792	0.78	-0.3
866,626	-		Psest_0792	0.78	-1.3
866,626	-		Psest_0792	0.78	-0.3
866,626	-		Psest_0792	0.78	+1.1
866,626	-		Psest_0792	0.78	-0.6
866,626	-		Psest_0792	0.78	-1.2
866,626	-		Psest_0792	0.78	-0.1
866,626	-		Psest_0792	0.78	-1.6
866,626	-		Psest_0792	0.78	-2.4
866,626	-		Psest_0792	0.78	+0.6
866,626	-		Psest_0792	0.78	+0.3
866,626	-		Psest_0792	0.78	-0.8
866,626	-		Psest_0792	0.78	-1.2
866,626	-		Psest_0792	0.78	-0.6
866,626	-		Psest_0792	0.78	-0.5
866,626	-		Psest_0792	0.78	-0.0
866,626	-		Psest_0792	0.78	-0.9
866,626	-		Psest_0792	0.78	-0.4
866,626	-		Psest_0792	0.78	-0.4
866,626	-		Psest_0792	0.78	-1.1
866,626	-		Psest_0792	0.78	-0.7
866,754	+		Psest_0792	0.83	-0.6
866,754	+		Psest_0792	0.83	-1.4
866,799	+		Psest_0792	0.86	-0.9
866,799	+		Psest_0792	0.86	-0.9
866,800	-		Psest_0792	0.86	-2.3
866,973	+				-0.4
866,998	-				-0.6
866,998	-				-0.3
866,998	-				-1.0
866,998	-				-0.6
866,998	-				-0.1
867,388	+		Psest_0793	0.11	-1.4
867,388	+		Psest_0793	0.11	-1.2
867,389	-		Psest_0793	0.11	+0.3
867,595	+		Psest_0793	0.22	-1.7
867,595	+		Psest_0793	0.22	+0.5
867,596	-		Psest_0793	0.22	-0.3
867,596	-		Psest_0793	0.22	-1.7
867,596	-		Psest_0793	0.22	-1.1
867,596	-		Psest_0793	0.22	-0.5
867,596	-		Psest_0793	0.22	+0.0
867,608	-		Psest_0793	0.22	-0.4
867,608	-		Psest_0793	0.22	-0.1
867,608	-		Psest_0793	0.22	+0.1
867,736	+		Psest_0793	0.29	-1.1
867,737	-		Psest_0793	0.29	-0.7
867,738	+		Psest_0793	0.29	-1.6
867,739	-		Psest_0793	0.29	-0.4
867,739	-		Psest_0793	0.29	-0.8
867,739	-		Psest_0793	0.29	+0.1
867,745	+		Psest_0793	0.29	-0.8
867,745	+		Psest_0793	0.29	+0.0
867,745	+		Psest_0793	0.29	-1.3
867,745	+		Psest_0793	0.29	-1.3
867,745	+		Psest_0793	0.29	-1.3
867,745	+		Psest_0793	0.29	-1.2
867,745	+		Psest_0793	0.29	-0.3
867,745	+		Psest_0793	0.29	-2.0
867,745	+		Psest_0793	0.29	+0.3
867,745	+		Psest_0793	0.29	-1.1
867,745	+		Psest_0793	0.29	-0.2
867,745	+		Psest_0793	0.29	-1.3
867,745	+		Psest_0793	0.29	-0.3
867,745	+		Psest_0793	0.29	+0.1
867,745	+		Psest_0793	0.29	+0.0
867,745	+		Psest_0793	0.29	-1.3
867,745	+		Psest_0793	0.29	-0.4
867,745	+		Psest_0793	0.29	-0.6
867,745	+		Psest_0793	0.29	-0.4
867,745	+		Psest_0793	0.29	-0.7
867,746	-		Psest_0793	0.30	-1.0
867,746	-		Psest_0793	0.30	+0.3
867,746	-		Psest_0793	0.30	-0.7
867,746	-		Psest_0793	0.30	-0.2
867,746	-		Psest_0793	0.30	-1.0
867,746	-		Psest_0793	0.30	-1.6
867,746	-		Psest_0793	0.30	-1.0
867,746	-		Psest_0793	0.30	-0.9
867,746	-		Psest_0793	0.30	-0.6
867,746	-		Psest_0793	0.30	-0.7
867,823	+		Psest_0793	0.34	-1.2
867,823	+		Psest_0793	0.34	-1.3
867,823	+		Psest_0793	0.34	-1.5
867,823	+		Psest_0793	0.34	-0.6
867,823	+		Psest_0793	0.34	-2.1
867,824	-		Psest_0793	0.34	+0.8
867,824	-		Psest_0793	0.34	-0.5
867,824	-		Psest_0793	0.34	+0.2
867,824	-		Psest_0793	0.34	-0.5
867,824	-		Psest_0793	0.34	-0.6
867,824	-		Psest_0793	0.34	-0.5
867,824	-		Psest_0793	0.34	-2.5
867,832	+		Psest_0793	0.34	-1.3
867,832	+		Psest_0793	0.34	-1.2
867,832	+		Psest_0793	0.34	-1.3
867,832	+		Psest_0793	0.34	-1.4
867,832	+		Psest_0793	0.34	+0.8
867,832	+		Psest_0793	0.34	+0.2
867,832	+		Psest_0793	0.34	-0.3
867,832	+		Psest_0793	0.34	-0.3
867,832	+		Psest_0793	0.34	-0.2
867,832	+		Psest_0793	0.34	-1.5
867,833	-		Psest_0793	0.34	-0.6
867,833	-		Psest_0793	0.34	-1.2
867,833	-		Psest_0793	0.34	-2.4
867,833	-		Psest_0793	0.34	-1.6
867,833	-		Psest_0793	0.34	-0.2
867,833	-		Psest_0793	0.34	+0.1
867,833	-		Psest_0793	0.34	-0.9
867,913	+		Psest_0793	0.38	-1.3
867,913	+		Psest_0793	0.38	-1.5
867,944	-		Psest_0793	0.40	+0.1
867,944	-		Psest_0793	0.40	+0.2
867,944	-		Psest_0793	0.40	-0.6
867,961	+		Psest_0793	0.41	-1.7
867,962	-		Psest_0793	0.41	-0.9