Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS06835

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,469,304	+				+1.4
1,469,305	-				-0.9
1,469,397	+				+0.1
1,469,397	+				+0.2
1,469,397	+				-1.4
1,469,397	+				+0.1
1,469,397	+				+0.0
1,469,397	+				+1.3
1,469,397	+				-0.7
1,469,397	+				+0.3
1,469,398	-				+1.2
1,469,398	-				+1.9
1,469,398	-				-0.5
1,469,398	-				+1.1
1,469,398	-				-0.7
1,469,398	-				-1.3
1,469,398	-				+0.3
1,469,398	-				+0.1
1,469,398	-				+0.4
1,469,398	-				-0.1
1,469,408	+				-0.9
1,469,408	+				-0.3
1,469,408	+				-0.2
1,469,408	+				-0.2
1,469,408	+				-0.5
1,469,409	-				+0.9
1,469,409	-				+0.2
1,469,409	-				+0.2
1,469,409	-				-0.5
1,469,409	-				+0.9
1,469,409	-				+2.5
1,469,409	-				-1.3
1,469,409	-				-0.5
1,469,461	-				+1.9
1,469,461	-				+1.5
1,469,469	+				-0.6
1,469,469	+				-2.4
1,469,469	+				+0.5
1,469,469	+				+1.0
1,469,469	+				-0.3
1,469,469	+				+0.1
1,469,469	+				+0.0
1,469,469	+				+0.4
1,469,469	+				+0.3
1,469,469	+				+1.9
1,469,469	+				-2.1
1,469,469	+				-1.5
1,469,469	+				-1.2
1,469,469	+				-0.9
1,469,469	+				-0.3
1,469,469	+				+1.4
1,469,469	+				-0.1
1,469,469	+				+0.3
1,469,469	+				-0.1
1,469,470	-				-0.5
1,469,470	-				-0.8
1,469,470	-				+0.9
1,469,470	-				-0.1
1,469,470	-				+0.9
1,469,470	-				-0.4
1,469,470	-				+0.0
1,469,470	-				+0.8
1,469,470	-				-0.1
1,469,470	-				-1.0
1,469,470	-				-2.0
1,469,470	-				+0.7
1,469,470	-				+0.7
1,469,470	-				+0.6
1,469,470	-				+0.4
1,469,470	-				-0.8
1,469,470	-				+0.9
1,469,470	-				+1.7
1,469,470	-				-0.0
1,469,470	-				+0.2
1,469,470	-				+0.2
1,469,470	-				-0.4
1,469,470	-				-2.0
1,469,470	-				-1.0
1,469,472	+				-0.9
1,469,472	+				+1.9
1,469,472	+				-2.0
1,469,472	+				-0.6
1,469,472	+				-1.2
1,469,472	+				-0.0
1,469,472	+				+0.7
1,469,472	+				+0.3
1,469,472	+				+0.9
1,469,472	+				+1.5
1,469,472	+				-0.9
1,469,472	+				+1.9
1,469,472	+				-0.2
1,469,472	+				+0.8
1,469,472	+				-0.6
1,469,472	+				+0.1
1,469,473	-				-2.8
1,469,473	-				+1.3
1,469,473	-				+0.9
1,469,473	-				-0.6
1,469,538	+		LRK54_RS06830	0.12	-0.2
1,469,538	+		LRK54_RS06830	0.12	-0.2
1,469,538	+		LRK54_RS06830	0.12	-1.1
1,469,538	+		LRK54_RS06830	0.12	-0.6
1,469,538	+		LRK54_RS06830	0.12	+0.4
1,469,538	+		LRK54_RS06830	0.12	-0.4
1,469,538	+		LRK54_RS06830	0.12	-0.1
1,469,538	+		LRK54_RS06830	0.12	+0.8
1,469,538	+		LRK54_RS06830	0.12	-0.4
1,469,538	+		LRK54_RS06830	0.12	+0.4
1,469,538	+		LRK54_RS06830	0.12	+2.9
1,469,538	+		LRK54_RS06830	0.12	-1.6
1,469,538	+		LRK54_RS06830	0.12	-2.3
1,469,538	+		LRK54_RS06830	0.12	+0.8
1,469,538	+		LRK54_RS06830	0.12	-0.2
1,469,538	+		LRK54_RS06830	0.12	+0.0
1,469,538	+		LRK54_RS06830	0.12	-1.2
1,469,538	+		LRK54_RS06830	0.12	+0.5
1,469,538	+		LRK54_RS06830	0.12	+3.5
1,469,538	+		LRK54_RS06830	0.12	+0.9
1,469,538	+		LRK54_RS06830	0.12	+0.8
1,469,539	-		LRK54_RS06830	0.12	+1.1
1,469,539	-		LRK54_RS06830	0.12	+0.3
1,469,539	-		LRK54_RS06830	0.12	-0.4
1,469,539	-		LRK54_RS06830	0.12	+2.9
1,469,539	-		LRK54_RS06830	0.12	+0.2
1,469,539	-		LRK54_RS06830	0.12	-0.3
1,469,539	-		LRK54_RS06830	0.12	-0.7
1,469,539	-		LRK54_RS06830	0.12	-0.2
1,469,539	-		LRK54_RS06830	0.12	+0.7
1,469,539	-		LRK54_RS06830	0.12	+0.9
1,469,539	-		LRK54_RS06830	0.12	+0.7
1,469,539	-		LRK54_RS06830	0.12	-0.9
1,469,539	-		LRK54_RS06830	0.12	-0.8
1,469,539	-		LRK54_RS06830	0.12	-0.1
1,469,539	-		LRK54_RS06830	0.12	-1.0
1,469,539	-		LRK54_RS06830	0.12	+0.6
1,469,539	-		LRK54_RS06830	0.12	-2.6
1,469,539	-		LRK54_RS06830	0.12	-0.5
1,469,539	-		LRK54_RS06830	0.12	+0.3
1,469,539	-		LRK54_RS06830	0.12	-0.4
1,469,583	+		LRK54_RS06830	0.18	+1.1
1,469,583	+		LRK54_RS06830	0.18	+2.0
1,469,583	+		LRK54_RS06830	0.18	+2.5
1,469,584	-		LRK54_RS06830	0.18	+0.5
1,469,584	-		LRK54_RS06830	0.18	+1.4
1,469,584	-		LRK54_RS06830	0.18	-0.9
1,469,584	-		LRK54_RS06830	0.18	+0.8
1,469,679	+		LRK54_RS06830	0.32	+0.1
1,469,679	+		LRK54_RS06830	0.32	+0.2
1,469,679	+		LRK54_RS06830	0.32	-1.3
1,469,679	+		LRK54_RS06830	0.32	-0.6
1,469,679	+		LRK54_RS06830	0.32	+1.5
1,469,679	+		LRK54_RS06830	0.32	+1.3
1,469,679	+		LRK54_RS06830	0.32	+0.6
1,469,679	+		LRK54_RS06830	0.32	-0.5
1,469,679	+		LRK54_RS06830	0.32	-0.2
1,469,679	+		LRK54_RS06830	0.32	-0.6
1,469,679	+		LRK54_RS06830	0.32	-0.3
1,469,679	+		LRK54_RS06830	0.32	-1.2
1,469,679	+		LRK54_RS06830	0.32	-0.2
1,469,679	+		LRK54_RS06830	0.32	+0.8
1,469,679	+		LRK54_RS06830	0.32	-0.3
1,469,679	+		LRK54_RS06830	0.32	-0.4
1,469,679	+		LRK54_RS06830	0.32	-0.3
1,469,680	-		LRK54_RS06830	0.32	-0.1
1,469,680	-		LRK54_RS06830	0.32	+0.0
1,469,680	-		LRK54_RS06830	0.32	-0.3
1,469,680	-		LRK54_RS06830	0.32	+1.2
1,469,680	-		LRK54_RS06830	0.32	+0.7
1,469,680	-		LRK54_RS06830	0.32	+0.4
1,469,680	-		LRK54_RS06830	0.32	-0.1
1,469,680	-		LRK54_RS06830	0.32	+0.2
1,469,680	-		LRK54_RS06830	0.32	-0.9
1,469,680	-		LRK54_RS06830	0.32	-0.2
1,469,680	-		LRK54_RS06830	0.32	+0.0
1,469,680	-		LRK54_RS06830	0.32	+2.5
1,469,680	-				-1.1
1,469,680	-		LRK54_RS06830	0.32	+0.3
1,469,680	-		LRK54_RS06830	0.32	-0.3
1,469,680	-		LRK54_RS06830	0.32	-0.2
1,469,680	-		LRK54_RS06830	0.32	+0.4
1,469,680	-		LRK54_RS06830	0.32	-0.8
1,469,730	+		LRK54_RS06830	0.39	-0.4
1,469,730	+		LRK54_RS06830	0.39	-0.5
1,469,730	+		LRK54_RS06830	0.39	+0.4
1,469,730	+		LRK54_RS06830	0.39	+0.0
1,469,730	+		LRK54_RS06830	0.39	+0.0
1,469,731	-		LRK54_RS06830	0.39	+0.3
1,469,731	-		LRK54_RS06830	0.39	+0.7
1,469,731	-		LRK54_RS06830	0.39	+0.0
1,469,731	-		LRK54_RS06830	0.39	-0.3
1,469,731	-		LRK54_RS06830	0.39	-0.9
1,469,731	-		LRK54_RS06830	0.39	-0.0
1,469,811	+		LRK54_RS06830	0.50	-2.0
1,469,811	+		LRK54_RS06830	0.50	-0.1
1,469,811	+		LRK54_RS06830	0.50	-0.4
1,469,811	+		LRK54_RS06830	0.50	-0.9
1,469,811	+		LRK54_RS06830	0.50	-2.1
1,469,811	+		LRK54_RS06830	0.50	-0.4
1,469,811	+		LRK54_RS06830	0.50	-0.9
1,469,811	+		LRK54_RS06830	0.50	-1.7
1,469,811	+		LRK54_RS06830	0.50	-0.3
1,469,811	+		LRK54_RS06830	0.50	+0.2
1,469,811	+		LRK54_RS06830	0.50	+0.3
1,469,811	+		LRK54_RS06830	0.50	-0.1
1,469,812	-		LRK54_RS06830	0.50	+0.0
1,469,812	-		LRK54_RS06830	0.50	+0.5
1,469,812	-		LRK54_RS06830	0.50	+1.6
1,469,812	-		LRK54_RS06830	0.50	-0.4
1,469,812	-		LRK54_RS06830	0.50	+0.6
1,469,812	-		LRK54_RS06830	0.50	-0.7
1,469,812	-		LRK54_RS06830	0.50	-0.3
1,469,812	-		LRK54_RS06830	0.50	-0.7
1,469,812	-		LRK54_RS06830	0.50	-0.1
1,469,812	-		LRK54_RS06830	0.50	-0.7
1,469,814	+		LRK54_RS06830	0.51	-0.3
1,469,814	+		LRK54_RS06830	0.51	+0.3
1,469,814	+		LRK54_RS06830	0.51	+0.7
1,469,814	+		LRK54_RS06830	0.51	+0.1
1,469,814	+		LRK54_RS06830	0.51	-0.4
1,469,814	+		LRK54_RS06830	0.51	-0.8
1,469,814	+		LRK54_RS06830	0.51	+0.8
1,469,814	+		LRK54_RS06830	0.51	+0.6
1,469,814	+		LRK54_RS06830	0.51	+0.1
1,469,814	+		LRK54_RS06830	0.51	+0.2
1,469,814	+		LRK54_RS06830	0.51	-0.1
1,469,814	+		LRK54_RS06830	0.51	-0.2
1,469,814	+		LRK54_RS06830	0.51	-0.5
1,469,814	+		LRK54_RS06830	0.51	-1.4
1,469,814	+		LRK54_RS06830	0.51	+0.3
1,469,814	+		LRK54_RS06830	0.51	-1.1
1,469,814	+		LRK54_RS06830	0.51	+0.5
1,469,814	+		LRK54_RS06830	0.51	-0.7
1,469,814	+		LRK54_RS06830	0.51	-0.4
1,469,814	+		LRK54_RS06830	0.51	-0.3
1,469,815	-		LRK54_RS06830	0.51	-0.3
1,469,815	-		LRK54_RS06830	0.51	-1.4
1,469,815	-		LRK54_RS06830	0.51	+0.3
1,469,815	-		LRK54_RS06830	0.51	-1.3
1,469,815	-		LRK54_RS06830	0.51	-0.4
1,469,815	-		LRK54_RS06830	0.51	-0.7
1,469,815	-		LRK54_RS06830	0.51	-0.4
1,469,815	-		LRK54_RS06830	0.51	+0.5
1,469,815	-		LRK54_RS06830	0.51	+0.6
1,469,815	-		LRK54_RS06830	0.51	+1.5
1,469,815	-		LRK54_RS06830	0.51	-0.6
1,469,815	-		LRK54_RS06830	0.51	-0.2
1,469,815	-		LRK54_RS06830	0.51	+1.2
1,469,815	-		LRK54_RS06830	0.51	-0.1
1,469,880	+		LRK54_RS06830	0.60	-0.2
1,469,880	+		LRK54_RS06830	0.60	-2.1
1,469,880	+		LRK54_RS06830	0.60	-0.8
1,469,880	+		LRK54_RS06830	0.60	-0.2
1,469,880	+		LRK54_RS06830	0.60	-0.4
1,469,880	+		LRK54_RS06830	0.60	-0.7
1,469,880	+		LRK54_RS06830	0.60	-1.4
1,469,880	+		LRK54_RS06830	0.60	+0.7
1,469,880	+		LRK54_RS06830	0.60	+0.1
1,469,880	+		LRK54_RS06830	0.60	+0.2
1,469,881	-		LRK54_RS06830	0.60	-1.1
1,469,881	-		LRK54_RS06830	0.60	-0.4
1,469,881	-		LRK54_RS06830	0.60	-0.0
1,469,881	-		LRK54_RS06830	0.60	+0.1
1,469,881	-		LRK54_RS06830	0.60	-0.5
1,469,881	-		LRK54_RS06830	0.60	+0.2
1,469,881	-		LRK54_RS06830	0.60	-0.4
1,469,881	-		LRK54_RS06830	0.60	+0.4
1,469,881	-		LRK54_RS06830	0.60	-0.2
1,469,881	-		LRK54_RS06830	0.60	+0.6
1,469,881	-		LRK54_RS06830	0.60	+0.6
1,469,881	-		LRK54_RS06830	0.60	-0.5
1,469,889	+		LRK54_RS06830	0.61	+0.1
1,469,889	+		LRK54_RS06830	0.61	-0.7
1,469,889	+		LRK54_RS06830	0.61	-2.0
1,469,889	+		LRK54_RS06830	0.61	-0.6
1,469,889	+		LRK54_RS06830	0.61	-0.0
1,469,889	+		LRK54_RS06830	0.61	-0.4
1,469,889	+		LRK54_RS06830	0.61	-1.8
1,469,889	+		LRK54_RS06830	0.61	-0.0
1,469,889	+		LRK54_RS06830	0.61	+0.1
1,469,890	-		LRK54_RS06830	0.61	-1.4
1,469,890	-		LRK54_RS06830	0.61	+0.3
1,469,890	-		LRK54_RS06830	0.61	-0.0
1,469,890	-		LRK54_RS06830	0.61	-1.1
1,469,890	-		LRK54_RS06830	0.61	+0.4
1,469,890	-		LRK54_RS06830	0.61	-0.4
1,469,890	-		LRK54_RS06830	0.61	+0.4
1,469,890	-		LRK54_RS06830	0.61	+0.4
1,469,890	-		LRK54_RS06830	0.61	+0.0
1,469,946	+		LRK54_RS06830	0.69	-2.3
1,469,946	+		LRK54_RS06830	0.69	+1.2
1,469,946	+		LRK54_RS06830	0.69	-0.6
1,469,946	+		LRK54_RS06830	0.69	+0.9
1,469,946	+		LRK54_RS06830	0.69	-0.2
1,469,946	+		LRK54_RS06830	0.69	-0.7
1,469,946	+		LRK54_RS06830	0.69	+0.1
1,469,946	+		LRK54_RS06830	0.69	+2.2
1,469,946	+		LRK54_RS06830	0.69	-0.7
1,469,946	+		LRK54_RS06830	0.69	-0.0
1,469,946	+		LRK54_RS06830	0.69	-0.7
1,469,946	+		LRK54_RS06830	0.69	+0.2
1,469,946	+		LRK54_RS06830	0.69	+0.6
1,469,946	+		LRK54_RS06830	0.69	-0.3
1,469,946	+		LRK54_RS06830	0.69	-1.8
1,469,946	+		LRK54_RS06830	0.69	-0.9
1,469,946	+		LRK54_RS06830	0.69	-0.2
1,469,947	-		LRK54_RS06830	0.69	+0.1
1,469,947	-		LRK54_RS06830	0.69	+0.4
1,469,947	-		LRK54_RS06830	0.69	-0.7
1,469,947	-		LRK54_RS06830	0.69	-0.3
1,469,947	-		LRK54_RS06830	0.69	-1.3
1,469,947	-		LRK54_RS06830	0.69	-0.1
1,469,947	-		LRK54_RS06830	0.69	-0.7
1,469,947	-		LRK54_RS06830	0.69	+0.9
1,469,947	-		LRK54_RS06830	0.69	-2.4
1,469,947	-		LRK54_RS06830	0.69	+2.6
1,469,947	-		LRK54_RS06830	0.69	-0.8
1,469,947	-		LRK54_RS06830	0.69	-0.4
1,469,947	-		LRK54_RS06830	0.69	+0.1
1,469,947	-		LRK54_RS06830	0.69	-1.5
1,469,947	-		LRK54_RS06830	0.69	+0.1
1,469,947	-		LRK54_RS06830	0.69	+0.2
1,469,947	-		LRK54_RS06830	0.69	-0.6
1,469,947	-		LRK54_RS06830	0.69	+0.0
1,469,947	-		LRK54_RS06830	0.69	-0.2
1,469,947	-		LRK54_RS06830	0.69	-0.4
1,469,988	+		LRK54_RS06830	0.75	-0.3
1,469,988	+		LRK54_RS06830	0.75	-0.4
1,469,988	+		LRK54_RS06830	0.75	+0.0
1,469,988	+		LRK54_RS06830	0.75	-0.1
1,469,988	+		LRK54_RS06830	0.75	+2.3
1,469,988	+		LRK54_RS06830	0.75	+1.7
1,469,988	+		LRK54_RS06830	0.75	+0.2
1,469,988	+		LRK54_RS06830	0.75	-1.8
1,469,988	+		LRK54_RS06830	0.75	-2.3
1,469,988	+		LRK54_RS06830	0.75	+0.8
1,469,988	+		LRK54_RS06830	0.75	-0.3
1,469,988	+		LRK54_RS06830	0.75	+0.3
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