Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS14180

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
3,159,001	-				-1.0
3,159,112	+		LRK54_RS14175	0.16	+0.8
3,159,112	+		LRK54_RS14175	0.16	-0.6
3,159,121	+		LRK54_RS14175	0.18	-0.2
3,159,122	-		LRK54_RS14175	0.18	+0.1
3,159,520	+		LRK54_RS14175	0.87	-2.8
3,159,520	+		LRK54_RS14175	0.87	-2.4
3,159,520	+		LRK54_RS14175	0.87	-0.8
3,159,521	-		LRK54_RS14175	0.87	+2.4
3,159,521	-		LRK54_RS14175	0.87	-0.2
3,159,521	-		LRK54_RS14175	0.87	-1.3
3,159,521	-		LRK54_RS14175	0.87	+1.6
3,159,521	-		LRK54_RS14175	0.87	+0.0
3,159,521	-		LRK54_RS14175	0.87	-0.4
3,159,521	-		LRK54_RS14175	0.87	+1.1
3,159,730	-				+1.6
3,159,743	+		LRK54_RS14180	0.10	-2.0
3,159,744	-		LRK54_RS14180	0.10	-0.9
3,159,744	-		LRK54_RS14180	0.10	+0.1
3,159,836	+		LRK54_RS14180	0.16	-1.2
3,159,836	+		LRK54_RS14180	0.16	-1.4
3,159,836	+		LRK54_RS14180	0.16	+0.6
3,159,836	+		LRK54_RS14180	0.16	+0.1
3,159,837	-		LRK54_RS14180	0.17	-0.3
3,159,837	-		LRK54_RS14180	0.17	+0.6
3,159,837	-		LRK54_RS14180	0.17	-0.6
3,159,837	-		LRK54_RS14180	0.17	-0.9
3,159,837	-		LRK54_RS14180	0.17	-0.3
3,159,953	+		LRK54_RS14180	0.24	+1.6
3,159,954	-		LRK54_RS14180	0.24	-1.4
3,159,954	-		LRK54_RS14180	0.24	-2.1
3,159,954	-		LRK54_RS14180	0.24	+0.1
3,160,535	+		LRK54_RS14180	0.63	-1.6
3,160,535	+		LRK54_RS14180	0.63	+0.6
3,160,535	+		LRK54_RS14180	0.63	-1.2
3,160,535	+		LRK54_RS14180	0.63	-0.4
3,160,535	+		LRK54_RS14180	0.63	+0.1
3,160,536	-		LRK54_RS14180	0.63	+0.1
3,160,536	-		LRK54_RS14180	0.63	+0.8
3,160,536	-		LRK54_RS14180	0.63	+0.4
3,160,536	-		LRK54_RS14180	0.63	-0.6
3,160,536	-		LRK54_RS14180	0.63	+0.4
3,160,536	-		LRK54_RS14180	0.63	-0.0
3,160,536	-		LRK54_RS14180	0.63	-0.7
3,160,536	-		LRK54_RS14180	0.63	+0.1
3,160,536	-		LRK54_RS14180	0.63	-1.1
3,160,790	+		LRK54_RS14180	0.79	-0.3
3,161,354	+		LRK54_RS14185	0.20	-1.7
3,161,354	+		LRK54_RS14185	0.20	+0.6
3,161,494	+		LRK54_RS14185	0.32	+1.4
3,161,730	+		LRK54_RS14185	0.53	+0.8
3,161,730	+		LRK54_RS14185	0.53	-1.1
3,161,730	+		LRK54_RS14185	0.53	-0.1
3,161,731	-		LRK54_RS14185	0.53	-0.6
3,161,731	-		LRK54_RS14185	0.53	-0.3
3,161,820	-		LRK54_RS14185	0.61	-1.4
3,161,820	-		LRK54_RS14185	0.61	+1.6
3,161,832	+		LRK54_RS14185	0.62	+0.2
3,161,832	+		LRK54_RS14185	0.62	+0.3
3,161,832	+		LRK54_RS14185	0.62	-0.3
3,161,833	-		LRK54_RS14185	0.62	+0.1
3,161,833	-		LRK54_RS14185	0.62	-0.7
3,161,833	-		LRK54_RS14185	0.62	+1.8
3,161,833	-		LRK54_RS14185	0.62	+1.0
3,161,833	-		LRK54_RS14185	0.62	-0.0
3,161,833	-		LRK54_RS14185	0.62	+2.3
3,162,078	+		LRK54_RS14185	0.84	-1.1
3,162,078	+		LRK54_RS14185	0.84	+0.1
3,162,078	+		LRK54_RS14185	0.84	-1.5
3,162,078	+		LRK54_RS14185	0.84	-0.7
3,162,078	+		LRK54_RS14185	0.84	-1.0
3,162,078	+		LRK54_RS14185	0.84	-2.6
3,162,078	+		LRK54_RS14185	0.84	-0.7
3,162,078	+		LRK54_RS14185	0.84	-0.7
3,162,079	-		LRK54_RS14185	0.84	+0.8
3,162,079	-		LRK54_RS14185	0.84	-2.0
3,162,079	-		LRK54_RS14185	0.84	+2.1