Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS12715

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
2,843,888	-				+1.0
2,843,888	-				+0.2
2,843,997	+				-1.4
2,843,997	+				-1.8
2,843,997	+				-0.1
2,843,997	+				+0.7
2,843,997	+				-2.2
2,843,997	+				-1.0
2,843,997	+				-0.8
2,843,997	+				-0.2
2,843,998	-				+0.0
2,843,998	-				-0.3
2,843,998	-				+0.2
2,843,998	-				-0.8
2,843,998	-				-0.2
2,843,998	-				-1.0
2,844,033	+				-0.8
2,844,033	+				-0.1
2,844,033	+				-0.6
2,844,033	+				-1.1
2,844,033	+				+0.5
2,844,033	+				+0.8
2,844,034	-				-2.3
2,844,096	+				+0.7
2,844,096	+				+1.4
2,844,097	-				+0.9
2,844,097	-				+1.4
2,844,097	-				-0.6
2,844,097	-				-2.1
2,844,117	-				+3.0
2,844,117	-				-2.0
2,844,117	-				+0.4
2,844,193	+				+0.1
2,844,193	+				+0.8
2,844,193	+				-1.4
2,844,193	+				-1.0
2,844,193	+				-0.8
2,844,193	+				+0.7
2,844,193	+				-1.7
2,844,193	+				-1.3
2,844,193	+				-2.8
2,844,193	+				+3.0
2,844,193	+				-2.5
2,844,194	-				-0.6
2,844,194	-				-0.7
2,844,194	-				+0.7
2,844,194	-				-0.2
2,844,194	-				+1.0
2,844,194	-				-1.1
2,844,194	-				+0.7
2,844,194	-				-1.3
2,844,194	-				+0.1
2,844,194	-				-1.1
2,844,194	-				-0.9
2,844,372	+		LRK54_RS12710	0.38	+0.7
2,844,418	+		LRK54_RS12710	0.48	+1.0
2,844,418	+		LRK54_RS12710	0.48	+1.2
2,844,418	+		LRK54_RS12710	0.48	-0.6
2,844,418	+		LRK54_RS12710	0.48	-0.0
2,844,419	-		LRK54_RS12710	0.49	+3.4
2,844,419	-		LRK54_RS12710	0.49	-0.6
2,844,419	-		LRK54_RS12710	0.49	+1.4
2,844,419	-		LRK54_RS12710	0.49	-1.4
2,844,419	-		LRK54_RS12710	0.49	-2.6
2,844,419	-		LRK54_RS12710	0.49	-1.2
2,844,493	+		LRK54_RS12710	0.64	+0.7
2,844,493	+		LRK54_RS12710	0.64	-1.1
2,844,493	+		LRK54_RS12710	0.64	-0.7
2,844,493	+		LRK54_RS12710	0.64	-0.0
2,844,493	+		LRK54_RS12710	0.64	-0.7
2,844,493	+		LRK54_RS12710	0.64	+0.0
2,844,493	+		LRK54_RS12710	0.64	-1.3
2,844,493	+		LRK54_RS12710	0.64	+0.4
2,844,493	+		LRK54_RS12710	0.64	+0.4
2,844,494	-		LRK54_RS12710	0.65	-1.6
2,844,494	-		LRK54_RS12710	0.65	-0.7
2,844,494	-		LRK54_RS12710	0.65	-1.5
2,844,494	-		LRK54_RS12710	0.65	-0.9
2,844,494	-		LRK54_RS12710	0.65	+0.4
2,844,494	-		LRK54_RS12710	0.65	-1.0
2,844,494	-		LRK54_RS12710	0.65	-0.4
2,844,571	+		LRK54_RS12710	0.81	+0.3
2,844,571	+		LRK54_RS12710	0.81	-0.6
2,844,571	+		LRK54_RS12710	0.81	-0.7
2,844,572	-		LRK54_RS12710	0.81	-0.1
2,844,572	-		LRK54_RS12710	0.81	+0.6
2,844,572	-		LRK54_RS12710	0.81	+1.4
2,844,572	-		LRK54_RS12710	0.81	-0.7
2,844,572	-		LRK54_RS12710	0.81	+0.4
2,844,580	+		LRK54_RS12710	0.83	+0.4
2,844,580	+		LRK54_RS12710	0.83	-1.9
2,844,580	+		LRK54_RS12710	0.83	-0.2
2,844,580	+		LRK54_RS12710	0.83	-2.5
2,844,580	+		LRK54_RS12710	0.83	+1.0
2,844,580	+		LRK54_RS12710	0.83	-0.2
2,844,580	+		LRK54_RS12710	0.83	-0.7
2,844,580	+		LRK54_RS12710	0.83	+0.2
2,844,580	+		LRK54_RS12710	0.83	-1.7
2,844,580	+		LRK54_RS12710	0.83	+0.8
2,844,580	+		LRK54_RS12710	0.83	+1.4
2,844,580	+		LRK54_RS12710	0.83	-0.2
2,844,580	+		LRK54_RS12710	0.83	+1.7
2,844,580	+		LRK54_RS12710	0.83	-0.9
2,844,581	-		LRK54_RS12710	0.83	-0.5
2,844,581	-		LRK54_RS12710	0.83	-0.6
2,844,581	-		LRK54_RS12710	0.83	-0.4
2,844,581	-		LRK54_RS12710	0.83	+0.1
2,844,581	-		LRK54_RS12710	0.83	-1.6
2,844,581	-		LRK54_RS12710	0.83	-1.7
2,844,581	-		LRK54_RS12710	0.83	-1.3
2,844,581	-		LRK54_RS12710	0.83	+3.0
2,844,581	-		LRK54_RS12710	0.83	-2.0
2,844,581	-		LRK54_RS12710	0.83	+1.7
2,844,581	-		LRK54_RS12710	0.83	-0.3
2,844,695	+				-1.4
2,844,695	+				+0.8
2,844,695	+				-1.3
2,844,696	-				-0.6
2,844,780	+				+0.3
2,844,780	+				-0.2
2,844,781	-				-0.0
2,845,244	+		LRK54_RS12715	0.11	+1.9
2,845,244	+		LRK54_RS12715	0.11	-1.3
2,845,244	+		LRK54_RS12715	0.11	-0.3
2,845,244	+		LRK54_RS12715	0.11	-1.0
2,845,244	+		LRK54_RS12715	0.11	-2.3
2,845,244	+		LRK54_RS12715	0.11	+1.7
2,845,244	+		LRK54_RS12715	0.11	-1.2
2,845,244	+		LRK54_RS12715	0.11	+0.2
2,845,244	+		LRK54_RS12715	0.11	+0.0
2,845,244	+		LRK54_RS12715	0.11	-2.2
2,845,244	+		LRK54_RS12715	0.11	-0.9
2,845,245	-		LRK54_RS12715	0.11	-0.6
2,845,245	-		LRK54_RS12715	0.11	+2.1
2,845,245	-		LRK54_RS12715	0.11	-0.3
2,845,245	-		LRK54_RS12715	0.11	-0.4
2,845,245	-		LRK54_RS12715	0.11	+0.2
2,845,245	-		LRK54_RS12715	0.11	+0.9
2,845,378	+		LRK54_RS12715	0.14	-0.7
2,845,378	+		LRK54_RS12715	0.14	-0.0
2,845,378	+		LRK54_RS12715	0.14	+0.8
2,845,378	+		LRK54_RS12715	0.14	-2.2
2,845,378	+		LRK54_RS12715	0.14	+0.3
2,845,378	+		LRK54_RS12715	0.14	-1.2
2,845,378	+		LRK54_RS12715	0.14	-1.3
2,845,378	+		LRK54_RS12715	0.14	-2.0
2,845,378	+		LRK54_RS12715	0.14	-0.1
2,845,378	+		LRK54_RS12715	0.14	-0.7
2,845,378	+		LRK54_RS12715	0.14	+1.4
2,845,378	+		LRK54_RS12715	0.14	+0.7
2,845,378	+		LRK54_RS12715	0.14	-0.0
2,845,378	+		LRK54_RS12715	0.14	-0.9
2,845,378	+		LRK54_RS12715	0.14	-2.6
2,845,378	+		LRK54_RS12715	0.14	-0.9
2,845,378	+		LRK54_RS12715	0.14	-0.0
2,845,378	+		LRK54_RS12715	0.14	-0.7
2,845,378	+		LRK54_RS12715	0.14	-0.0
2,845,378	+		LRK54_RS12715	0.14	-0.1
2,845,378	+		LRK54_RS12715	0.14	-0.0
2,845,378	+		LRK54_RS12715	0.14	+0.4
2,845,378	+		LRK54_RS12715	0.14	+1.0
2,845,378	+		LRK54_RS12715	0.14	-0.0
2,845,379	-		LRK54_RS12715	0.14	-1.6
2,845,379	-		LRK54_RS12715	0.14	+1.2
2,845,379	-		LRK54_RS12715	0.14	+0.4
2,845,379	-		LRK54_RS12715	0.14	+3.0
2,845,379	-		LRK54_RS12715	0.14	-0.5
2,845,379	-		LRK54_RS12715	0.14	-0.4
2,845,379	-		LRK54_RS12715	0.14	-0.5
2,845,379	-		LRK54_RS12715	0.14	+0.4
2,845,379	-		LRK54_RS12715	0.14	-0.3
2,845,379	-		LRK54_RS12715	0.14	+1.0
2,845,379	-		LRK54_RS12715	0.14	-0.5
2,845,379	-		LRK54_RS12715	0.14	-0.9
2,845,379	-		LRK54_RS12715	0.14	+0.3
2,845,379	-		LRK54_RS12715	0.14	+0.6
2,845,379	-		LRK54_RS12715	0.14	+1.8
2,845,379	-		LRK54_RS12715	0.14	-0.1
2,845,379	-		LRK54_RS12715	0.14	-0.2
2,845,379	-		LRK54_RS12715	0.14	+1.4
2,845,379	-		LRK54_RS12715	0.14	+0.7
2,845,379	-		LRK54_RS12715	0.14	-1.0
2,845,379	-		LRK54_RS12715	0.14	+0.3
2,845,379	-		LRK54_RS12715	0.14	+0.2
2,845,379	-		LRK54_RS12715	0.14	-1.3
2,845,379	-		LRK54_RS12715	0.14	+0.4
2,845,379	-		LRK54_RS12715	0.14	-0.1
2,845,379	-		LRK54_RS12715	0.14	-0.8
2,845,379	-		LRK54_RS12715	0.14	-1.7
2,845,379	-		LRK54_RS12715	0.14	-2.0
2,845,379	-		LRK54_RS12715	0.14	-0.4
2,845,379	-		LRK54_RS12715	0.14	+0.4
2,845,379	-		LRK54_RS12715	0.14	+0.6
2,845,379	-		LRK54_RS12715	0.14	+0.2
2,845,507	-		LRK54_RS12715	0.17	+0.1
2,845,798	+		LRK54_RS12715	0.25	+0.6
2,845,798	+		LRK54_RS12715	0.25	+1.2
2,845,799	-		LRK54_RS12715	0.25	+1.1
2,845,799	-		LRK54_RS12715	0.25	+1.3
2,845,799	-		LRK54_RS12715	0.25	+1.8
2,845,913	-		LRK54_RS12715	0.27	+0.0
2,845,913	-		LRK54_RS12715	0.27	-0.5
2,845,913	-		LRK54_RS12715	0.27	-1.4
2,845,948	+		LRK54_RS12715	0.28	-2.1
2,845,948	+		LRK54_RS12715	0.28	-0.6
2,845,948	+		LRK54_RS12715	0.28	-0.5
2,845,949	-		LRK54_RS12715	0.28	+0.9
2,846,062	+		LRK54_RS12715	0.31	-2.4
2,846,063	-		LRK54_RS12715	0.31	-1.1
2,846,063	-		LRK54_RS12715	0.31	+0.8
2,846,063	-		LRK54_RS12715	0.31	-1.4
2,846,506	+		LRK54_RS12715	0.42	-1.7
2,846,507	-		LRK54_RS12715	0.42	-1.6
2,846,725	-		LRK54_RS12715	0.47	+1.6
2,846,725	-		LRK54_RS12715	0.47	-0.2
2,846,725	-		LRK54_RS12715	0.47	-1.8
2,846,845	+		LRK54_RS12715	0.50	+1.4
2,846,845	+		LRK54_RS12715	0.50	+1.0
2,846,913	+		LRK54_RS12715	0.52	+1.4
2,846,913	+		LRK54_RS12715	0.52	-0.9
2,846,913	+		LRK54_RS12715	0.52	+0.2
2,846,913	+		LRK54_RS12715	0.52	+0.4
2,846,913	+		LRK54_RS12715	0.52	-1.0
2,846,913	+		LRK54_RS12715	0.52	+1.8
2,846,913	+		LRK54_RS12715	0.52	+0.1
2,846,913	+		LRK54_RS12715	0.52	+1.2
2,846,913	+		LRK54_RS12715	0.52	+0.2
2,846,914	-		LRK54_RS12715	0.52	-0.9
2,846,914	-		LRK54_RS12715	0.52	+0.6
2,846,914	-		LRK54_RS12715	0.52	+2.0
2,846,914	-		LRK54_RS12715	0.52	+1.0
2,846,914	-		LRK54_RS12715	0.52	-0.2
2,846,914	-		LRK54_RS12715	0.52	+0.4
2,846,914	-		LRK54_RS12715	0.52	-1.6
2,846,914	-		LRK54_RS12715	0.52	-0.6
2,846,914	-		LRK54_RS12715	0.52	-0.2
2,846,914	-		LRK54_RS12715	0.52	-1.0
2,846,914	-		LRK54_RS12715	0.52	+1.0
2,846,914	-		LRK54_RS12715	0.52	-1.8
2,846,914	-		LRK54_RS12715	0.52	-0.9
2,846,917	+		LRK54_RS12715	0.52	-0.4
2,846,917	+		LRK54_RS12715	0.52	+0.2
2,846,917	+		LRK54_RS12715	0.52	-0.0
2,846,917	+		LRK54_RS12715	0.52	-0.1
2,846,917	+		LRK54_RS12715	0.52	-0.1
2,846,917	+		LRK54_RS12715	0.52	-1.9
2,846,917	+		LRK54_RS12715	0.52	+0.3
2,846,917	+		LRK54_RS12715	0.52	+0.4
2,846,917	+		LRK54_RS12715	0.52	+0.6
2,846,917	+		LRK54_RS12715	0.52	-2.3
2,846,917	+		LRK54_RS12715	0.52	+0.1
2,846,917	+		LRK54_RS12715	0.52	-1.3
2,846,917	+		LRK54_RS12715	0.52	+0.7
2,846,917	+		LRK54_RS12715	0.52	-0.5
2,846,917	+		LRK54_RS12715	0.52	+2.0
2,846,917	+		LRK54_RS12715	0.52	-0.6
2,846,918	-		LRK54_RS12715	0.52	+3.0
2,846,918	-		LRK54_RS12715	0.52	+0.3
2,846,918	-		LRK54_RS12715	0.52	+2.0
2,846,918	-		LRK54_RS12715	0.52	+0.3
2,846,918	-		LRK54_RS12715	0.52	+0.8
2,846,918	-		LRK54_RS12715	0.52	+0.7
2,846,918	-		LRK54_RS12715	0.52	+0.4
2,846,918	-		LRK54_RS12715	0.52	+2.0
2,846,918	-		LRK54_RS12715	0.52	-1.5
2,846,918	-		LRK54_RS12715	0.52	+0.6
2,846,918	-		LRK54_RS12715	0.52	-0.4
2,846,918	-		LRK54_RS12715	0.52	+0.4
2,846,918	-		LRK54_RS12715	0.52	-0.9
2,847,026	+		LRK54_RS12715	0.55	+1.6
2,847,026	+		LRK54_RS12715	0.55	-0.4
2,847,026	+		LRK54_RS12715	0.55	+1.4
2,847,027	-		LRK54_RS12715	0.55	-1.8
2,847,027	-		LRK54_RS12715	0.55	-0.3
2,847,027	-		LRK54_RS12715	0.55	+1.3
2,847,145	+		LRK54_RS12715	0.58	-0.4
2,847,145	+		LRK54_RS12715	0.58	+0.1
2,847,145	+		LRK54_RS12715	0.58	-0.8
2,847,145	+		LRK54_RS12715	0.58	-0.0
2,847,145	+		LRK54_RS12715	0.58	-1.1
2,847,145	+		LRK54_RS12715	0.58	-1.0
2,847,145	+		LRK54_RS12715	0.58	-1.8
2,847,146	-		LRK54_RS12715	0.58	+2.0
2,847,146	-		LRK54_RS12715	0.58	+2.4
2,847,255	-		LRK54_RS12715	0.60	-1.8
2,847,439	+		LRK54_RS12715	0.65	-2.5
2,847,562	+		LRK54_RS12715	0.68	+1.5
2,847,562	+		LRK54_RS12715	0.68	-0.5
2,847,562	+		LRK54_RS12715	0.68	-0.6
2,847,562	+		LRK54_RS12715	0.68	+1.1
2,847,562	+		LRK54_RS12715	0.68	-0.3
2,847,562	+		LRK54_RS12715	0.68	+0.6
2,847,563	-		LRK54_RS12715	0.68	-2.7
2,847,563	-		LRK54_RS12715	0.68	-0.6
2,847,563	-		LRK54_RS12715	0.68	-1.0
2,847,563	-		LRK54_RS12715	0.68	-0.8
2,847,563	-		LRK54_RS12715	0.68	+1.2
2,847,563	-		LRK54_RS12715	0.68	-1.3
2,847,563	-		LRK54_RS12715	0.68	-0.1
2,847,563	-		LRK54_RS12715	0.68	+0.6
2,847,563	-		LRK54_RS12715	0.68	-0.8
2,847,574	+		LRK54_RS12715	0.68	+0.6
2,847,574	+		LRK54_RS12715	0.68	+1.6
2,847,575	-		LRK54_RS12715	0.68	-0.4
2,848,273	+		LRK54_RS12715	0.85	-0.0
2,848,273	+		LRK54_RS12715	0.85	+0.4
2,848,273	+		LRK54_RS12715	0.85	+1.8
2,848,274	-		LRK54_RS12715	0.85	-0.4
2,848,274	-		LRK54_RS12715	0.85	+3.3
2,848,274	-		LRK54_RS12715	0.85	-0.2
2,848,522	+				-0.5
2,848,522	+				+0.6
2,848,522	+				+2.0
2,848,523	-				+1.0
2,848,523	-				+0.6
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