Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS17160

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
3,744,627	+				-0.2
3,744,628	-				+0.9
3,744,754	+				-1.0
3,744,754	+				-0.5
3,744,755	-				-0.3
3,744,755	-				-1.5
3,744,755	-				-2.1
3,744,854	+		LRK54_RS17155	0.13	+0.0
3,744,854	+		LRK54_RS17155	0.13	-0.7
3,744,883	+		LRK54_RS17155	0.17	-0.8
3,744,883	+		LRK54_RS17155	0.17	-0.8
3,744,883	+		LRK54_RS17155	0.17	-0.3
3,744,883	+		LRK54_RS17155	0.17	-0.2
3,744,883	+		LRK54_RS17155	0.17	-1.2
3,744,883	+		LRK54_RS17155	0.17	-1.7
3,744,883	+		LRK54_RS17155	0.17	+0.6
3,744,883	+		LRK54_RS17155	0.17	-0.0
3,744,884	-		LRK54_RS17155	0.17	-1.5
3,744,884	-		LRK54_RS17155	0.17	+0.5
3,744,884	-		LRK54_RS17155	0.17	-0.0
3,744,884	-		LRK54_RS17155	0.17	+0.4
3,744,884	-		LRK54_RS17155	0.17	-1.0
3,744,922	+		LRK54_RS17155	0.22	-0.2
3,744,922	+		LRK54_RS17155	0.22	+1.8
3,744,922	+		LRK54_RS17155	0.22	+0.4
3,744,922	+		LRK54_RS17155	0.22	-0.3
3,744,922	+		LRK54_RS17155	0.22	-0.4
3,744,923	-		LRK54_RS17155	0.22	-1.1
3,744,923	-		LRK54_RS17155	0.22	+0.7
3,744,923	-		LRK54_RS17155	0.22	-0.2
3,744,923	-		LRK54_RS17155	0.22	-2.4
3,744,923	-		LRK54_RS17155	0.22	-0.4
3,744,926	+		LRK54_RS17155	0.22	+0.8
3,744,926	+		LRK54_RS17155	0.22	-0.9
3,744,926	+		LRK54_RS17155	0.22	+0.5
3,744,926	+		LRK54_RS17155	0.22	-1.0
3,744,926	+		LRK54_RS17155	0.22	-1.3
3,744,926	+		LRK54_RS17155	0.22	-1.2
3,744,926	+		LRK54_RS17155	0.22	-0.7
3,744,927	-		LRK54_RS17155	0.22	+0.2
3,744,927	-		LRK54_RS17155	0.22	+0.5
3,744,927	-		LRK54_RS17155	0.22	-1.2
3,744,927	-		LRK54_RS17155	0.22	-0.6
3,744,927	-		LRK54_RS17155	0.22	+1.1
3,744,927	-		LRK54_RS17155	0.22	-1.4
3,744,927	-		LRK54_RS17155	0.22	+0.7
3,744,927	-		LRK54_RS17155	0.22	+0.3
3,744,927	-		LRK54_RS17155	0.22	-1.0
3,744,927	-		LRK54_RS17155	0.22	+1.0
3,744,934	+		LRK54_RS17155	0.23	-1.5
3,744,935	-		LRK54_RS17155	0.23	+1.0
3,744,935	-		LRK54_RS17155	0.23	+0.4
3,744,961	-		LRK54_RS17155	0.26	-1.9
3,744,961	-		LRK54_RS17155	0.26	-1.5
3,744,987	+		LRK54_RS17155	0.30	-0.9
3,744,987	+		LRK54_RS17155	0.30	+1.2
3,744,987	+		LRK54_RS17155	0.30	-0.2
3,744,988	-		LRK54_RS17155	0.30	+0.0
3,745,090	+		LRK54_RS17155	0.43	+0.8
3,745,090	+		LRK54_RS17155	0.43	+1.1
3,745,091	-		LRK54_RS17155	0.43	-1.8
3,745,129	+		LRK54_RS17155	0.48	-0.5
3,745,130	-		LRK54_RS17155	0.48	-0.6
3,745,130	-		LRK54_RS17155	0.48	+0.2
3,745,239	+		LRK54_RS17155	0.62	-0.9
3,745,239	+		LRK54_RS17155	0.62	+1.8
3,745,239	+		LRK54_RS17155	0.62	-1.9
3,745,239	+		LRK54_RS17155	0.62	-0.1
3,745,240	-		LRK54_RS17155	0.62	+0.0
3,745,240	-		LRK54_RS17155	0.62	+1.8
3,745,240	-		LRK54_RS17155	0.62	-2.8
3,745,311	+		LRK54_RS17155	0.71	+1.8
3,745,311	+		LRK54_RS17155	0.71	-0.7
3,745,311	+		LRK54_RS17155	0.71	-0.6
3,745,311	+		LRK54_RS17155	0.71	-1.3
3,745,311	+		LRK54_RS17155	0.71	-0.3
3,745,311	+		LRK54_RS17155	0.71	-0.2
3,745,311	+		LRK54_RS17155	0.71	-1.8
3,745,311	+		LRK54_RS17155	0.71	-0.0
3,745,311	+		LRK54_RS17155	0.71	+0.0
3,745,312	-		LRK54_RS17155	0.71	-1.7
3,745,312	-		LRK54_RS17155	0.71	-1.2
3,745,312	-		LRK54_RS17155	0.71	+1.0
3,745,312	-		LRK54_RS17155	0.71	-1.7
3,745,312	-		LRK54_RS17155	0.71	-0.6
3,745,863	+		LRK54_RS17160	0.19	+1.4
3,745,884	+		LRK54_RS17160	0.20	-0.3
3,746,650	+		LRK54_RS17160	0.64	+2.3
3,746,793	+		LRK54_RS17160	0.72	-0.6
3,747,234	-				-0.2
3,747,234	-				-1.4
3,747,234	-				+0.5
3,747,234	-				-1.0
3,747,234	-				+0.7
3,747,357	-				-1.2
3,747,357	-				+0.8
3,747,409	+				+1.3
3,747,410	-				+1.1
3,747,410	-				+1.5
3,747,410	-				+0.5
3,747,492	+				+1.3
3,747,492	+				+0.5
3,747,492	+				+0.5
3,747,492	+				+0.8
3,747,492	+				-2.5
3,747,492	+				+1.0
3,747,492	+				+0.2
3,747,492	+				-0.1
3,747,492	+				-0.6
3,747,492	+				-0.2
3,747,492	+				-1.0
3,747,492	+				+1.3
3,747,492	+				+0.3
3,747,492	+				+0.8
3,747,492	+				+0.2
3,747,492	+				+2.0
3,747,492	+				+2.1
3,747,492	+				+0.7
3,747,492	+				-0.5
3,747,492	+				+1.2
3,747,492	+				-0.6
3,747,492	+				-0.9
3,747,492	+				-1.0
3,747,492	+				-0.5
3,747,492	+				+0.0
3,747,492	+				-0.6
3,747,492	+				-1.8
3,747,492	+				+0.0
3,747,492	+				-0.3
3,747,492	+				+0.8
3,747,492	+				-2.8
3,747,493	-				+0.8
3,747,493	-				+1.4
3,747,493	-				-0.5
3,747,493	-				-1.5
3,747,493	-				+0.1
3,747,493	-				-0.5
3,747,493	-				-1.1
3,747,493	-				-1.0
3,747,493	-				+0.0
3,747,493	-				+1.0
3,747,493	-				-0.3
3,747,493	-				-0.6
3,747,493	-				-0.4
3,747,493	-				+1.5
3,747,493	-				-0.4
3,747,493	-				+0.3
3,747,493	-				-0.8
3,747,493	-				-0.7
3,747,493	-				+1.8
3,747,493	-				+2.3
3,747,493	-				-1.7
3,747,493	-				+2.8
3,747,493	-				-0.7
3,747,493	-				-1.1
3,747,493	-				-0.5
3,747,493	-				-0.6
3,747,493	-				+0.5
3,747,493	-				-0.7
3,747,493	-				-0.2
3,747,495	+				-0.9
3,747,495	+				+0.0
3,747,495	+				-1.2
3,747,495	+				-0.7
3,747,495	+				-0.0
3,747,495	+				+0.8
3,747,495	+				-2.7
3,747,495	+				+0.2
3,747,495	+				-2.5
3,747,495	+				+0.4
3,747,495	+				-1.9
3,747,495	+				-1.0
3,747,495	+				-0.9
3,747,495	+				-1.1
3,747,495	+				-2.0
3,747,495	+				+0.5
3,747,495	+				+0.8
3,747,495	+				-0.5
3,747,496	-				-0.1
3,747,496	-				+0.5
3,747,496	-				-1.2
3,747,496	-				+0.0
3,747,496	-				-0.5
3,747,496	-				+0.1
3,747,496	-				-1.9
3,747,496	-				-0.5
3,747,496	-				+0.5
3,747,496	-				+2.2
3,747,496	-				-1.4
3,747,496	-				+1.8
3,747,496	-				-0.3
3,747,496	-				-0.7
3,747,496	-				+0.2
3,747,496	-				-0.3
3,747,496	-				-1.8
3,747,496	-				-0.2
3,747,496	-				-0.9
3,747,496	-				+0.1
3,747,496	-				-1.5
3,747,496	-				+0.8
3,747,496	-				-1.6
3,747,496	-				-0.6
3,747,496	-				-2.8
3,747,496	-				-0.7
3,747,496	-				+0.7
3,747,496	-				+0.3
3,747,496	-				-1.1
3,747,618	+				-0.4
3,747,618	+				-0.3
3,747,618	+				-1.4
3,747,618	+				-0.3
3,747,618	+				-0.4
3,747,618	+				+0.4
3,747,618	+				-0.7
3,747,618	+				+0.4
3,747,618	+				+2.2
3,747,618	+				-0.6
3,747,618	+				+1.8
3,747,619	-				+2.6
3,747,619	-				-0.3
3,747,619	-				-1.2
3,747,619	-				-0.7
3,747,619	-				-0.3
3,747,619	-				+1.8
3,747,619	-				+0.0
3,747,619	-				-0.5
3,747,675	+				+0.8
3,747,675	+				+0.0
3,747,675	+				-0.4
3,747,675	+				-0.8
3,747,675	+				-0.2
3,747,675	+				+0.8
3,747,675	+				-0.2
3,747,676	-				-1.4
3,747,676	-				+0.7
3,747,676	-				-1.1
3,747,676	-				+1.3
3,747,676	-				-0.5
3,747,676	-				+0.5
3,747,676	-				-1.0
3,747,676	-				-2.2
3,747,676	-				+0.8
3,747,676	-				-0.7
3,747,849	+		LRK54_RS17165	0.14	+1.3
3,747,849	+		LRK54_RS17165	0.14	+0.3
3,747,850	-		LRK54_RS17165	0.14	-0.2
3,747,850	-		LRK54_RS17165	0.14	-0.5
3,747,850	-		LRK54_RS17165	0.14	+0.6
3,747,850	-		LRK54_RS17165	0.14	-1.0
3,747,939	+		LRK54_RS17165	0.16	-0.7
3,748,113	+		LRK54_RS17165	0.21	-2.8
3,748,113	+		LRK54_RS17165	0.21	-1.1
3,748,113	+		LRK54_RS17165	0.21	-0.3
3,748,113	+		LRK54_RS17165	0.21	-0.5
3,748,113	+		LRK54_RS17165	0.21	-0.8
3,748,113	+		LRK54_RS17165	0.21	+0.5
3,748,113	+		LRK54_RS17165	0.21	+0.4
3,748,113	+		LRK54_RS17165	0.21	+0.8
3,748,113	+		LRK54_RS17165	0.21	+1.4
3,748,113	+		LRK54_RS17165	0.21	-0.0
3,748,113	+		LRK54_RS17165	0.21	-1.4
3,748,113	+		LRK54_RS17165	0.21	+1.3
3,748,113	+		LRK54_RS17165	0.21	-1.9
3,748,114	-		LRK54_RS17165	0.21	+0.3
3,748,114	-		LRK54_RS17165	0.21	-1.1
3,748,114	-		LRK54_RS17165	0.21	-0.7
3,748,114	-		LRK54_RS17165	0.21	+1.5
3,748,114	-		LRK54_RS17165	0.21	-0.0
3,748,114	-		LRK54_RS17165	0.21	+0.3
3,748,114	-		LRK54_RS17165	0.21	-0.2
3,748,114	-		LRK54_RS17165	0.21	-0.1
3,748,114	-		LRK54_RS17165	0.21	+0.5
3,748,114	-		LRK54_RS17165	0.21	-0.8
3,748,114	-		LRK54_RS17165	0.21	-0.4
3,748,114	-		LRK54_RS17165	0.21	-1.0
3,748,114	-		LRK54_RS17165	0.21	+0.5
3,748,114	-		LRK54_RS17165	0.21	+0.4
3,748,189	+		LRK54_RS17165	0.23	+0.1
3,748,189	+		LRK54_RS17165	0.23	-0.6
3,748,189	+		LRK54_RS17165	0.23	-0.1
3,748,190	-		LRK54_RS17165	0.23	-2.0
3,748,190	-		LRK54_RS17165	0.23	-1.4
3,748,190	-		LRK54_RS17165	0.23	+1.3