Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS14580

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
3,234,063	-		LRK54_RS14575	0.17	+0.1
3,234,157	+		LRK54_RS14575	0.26	-1.3
3,234,157	+		LRK54_RS14575	0.26	-1.3
3,234,157	+		LRK54_RS14575	0.26	-0.9
3,234,157	+		LRK54_RS14575	0.26	+0.4
3,234,157	+		LRK54_RS14575	0.26	-0.2
3,234,157	+		LRK54_RS14575	0.26	-0.2
3,234,157	+		LRK54_RS14575	0.26	+0.7
3,234,157	+		LRK54_RS14575	0.26	+0.7
3,234,157	+		LRK54_RS14575	0.26	-0.6
3,234,157	+		LRK54_RS14575	0.26	+0.3
3,234,157	+		LRK54_RS14575	0.26	+0.1
3,234,157	+		LRK54_RS14575	0.26	-1.0
3,234,157	+		LRK54_RS14575	0.26	+1.1
3,234,157	+		LRK54_RS14575	0.26	+0.6
3,234,157	+		LRK54_RS14575	0.26	+0.1
3,234,157	+		LRK54_RS14575	0.26	-0.5
3,234,157	+		LRK54_RS14575	0.26	+0.0
3,234,157	+		LRK54_RS14575	0.26	+1.2
3,234,158	-		LRK54_RS14575	0.26	+0.9
3,234,158	-		LRK54_RS14575	0.26	+2.1
3,234,158	-		LRK54_RS14575	0.26	-0.1
3,234,158	-		LRK54_RS14575	0.26	+0.4
3,234,158	-		LRK54_RS14575	0.26	-0.5
3,234,158	-		LRK54_RS14575	0.26	-0.1
3,234,158	-		LRK54_RS14575	0.26	+1.1
3,234,158	-		LRK54_RS14575	0.26	-1.4
3,234,158	-		LRK54_RS14575	0.26	-0.6
3,234,208	+		LRK54_RS14575	0.31	+0.8
3,234,208	+		LRK54_RS14575	0.31	+0.4
3,234,208	+		LRK54_RS14575	0.31	-1.3
3,234,208	+		LRK54_RS14575	0.31	-1.4
3,234,208	+		LRK54_RS14575	0.31	+0.1
3,234,208	+		LRK54_RS14575	0.31	-0.8
3,234,208	+		LRK54_RS14575	0.31	+0.8
3,234,208	+		LRK54_RS14575	0.31	+0.6
3,234,209	-		LRK54_RS14575	0.31	-0.5
3,234,209	-		LRK54_RS14575	0.31	-0.8
3,234,209	-		LRK54_RS14575	0.31	-1.5
3,234,209	-		LRK54_RS14575	0.31	-0.1
3,234,209	-		LRK54_RS14575	0.31	+0.6
3,234,209	-		LRK54_RS14575	0.31	+0.0
3,234,209	-		LRK54_RS14575	0.31	-0.1
3,234,250	+		LRK54_RS14575	0.35	-0.0
3,234,250	+		LRK54_RS14575	0.35	-0.7
3,234,250	+		LRK54_RS14575	0.35	-2.1
3,234,250	+		LRK54_RS14575	0.35	+0.9
3,234,250	+		LRK54_RS14575	0.35	-0.3
3,234,250	+		LRK54_RS14575	0.35	-1.1
3,234,250	+		LRK54_RS14575	0.35	-0.2
3,234,250	+		LRK54_RS14575	0.35	+0.3
3,234,250	+		LRK54_RS14575	0.35	-0.0
3,234,250	+		LRK54_RS14575	0.35	-0.1
3,234,250	+		LRK54_RS14575	0.35	-0.0
3,234,250	+		LRK54_RS14575	0.35	-0.1
3,234,251	-		LRK54_RS14575	0.36	-0.9
3,234,251	-		LRK54_RS14575	0.36	-1.6
3,234,251	-		LRK54_RS14575	0.36	-0.1
3,234,251	-		LRK54_RS14575	0.36	-0.3
3,234,251	-		LRK54_RS14575	0.36	+0.1
3,234,251	-		LRK54_RS14575	0.36	-0.0
3,234,251	-		LRK54_RS14575	0.36	-1.1
3,234,251	-		LRK54_RS14575	0.36	+0.8
3,234,251	-		LRK54_RS14575	0.36	-0.6
3,234,251	-		LRK54_RS14575	0.36	-0.4
3,234,251	-		LRK54_RS14575	0.36	-1.5
3,234,251	-		LRK54_RS14575	0.36	-0.7
3,234,251	-		LRK54_RS14575	0.36	-0.9
3,234,251	-		LRK54_RS14575	0.36	+0.1
3,234,251	-		LRK54_RS14575	0.36	-0.4
3,234,580	+		LRK54_RS14575	0.69	+0.3
3,234,580	+		LRK54_RS14575	0.69	+0.2
3,234,580	+		LRK54_RS14575	0.69	-1.3
3,234,580	+		LRK54_RS14575	0.69	-0.3
3,234,581	-		LRK54_RS14575	0.69	-0.4
3,234,581	-		LRK54_RS14575	0.69	+1.7
3,234,581	-		LRK54_RS14575	0.69	-0.4
3,234,619	+		LRK54_RS14575	0.73	-1.4
3,234,715	+		LRK54_RS14575	0.82	-0.3
3,234,715	+		LRK54_RS14575	0.82	-0.1
3,234,715	+		LRK54_RS14575	0.82	+0.4
3,234,715	+		LRK54_RS14575	0.82	-1.0
3,234,715	+		LRK54_RS14575	0.82	+1.2
3,234,716	-		LRK54_RS14575	0.82	-1.1
3,234,716	-		LRK54_RS14575	0.82	-1.2
3,234,716	-		LRK54_RS14575	0.82	+0.1
3,234,716	-		LRK54_RS14575	0.82	+0.3
3,234,716	-		LRK54_RS14575	0.82	+0.2
3,234,716	-		LRK54_RS14575	0.82	+0.9
3,234,716	-		LRK54_RS14575	0.82	-0.3
3,234,716	-		LRK54_RS14575	0.82	+0.5
3,234,716	-		LRK54_RS14575	0.82	-0.1
3,234,744	-		LRK54_RS14575	0.85	+0.5
3,234,830	+				+0.3
3,234,830	+				+1.2
3,235,041	+		LRK54_RS14580	0.77	+1.0
3,235,042	-		LRK54_RS14580	0.78	+0.8
3,235,150	+				-0.9
3,235,182	+				-1.8
3,235,182	+				-0.1
3,235,182	+				+0.1
3,235,182	+				+2.0
3,235,182	+				+0.5
3,235,182	+				-1.1
3,235,182	+				+0.1
3,235,182	+				+0.5
3,235,182	+				-0.3
3,235,182	+				-1.8
3,235,182	+				+0.1
3,235,182	+				-0.6
3,235,182	+				+0.9
3,235,182	+				-0.1
3,235,183	-				+0.6
3,235,183	-				-0.6
3,235,183	-				-0.5
3,235,183	-				-0.3
3,235,183	-				+1.1
3,235,183	-				-1.4
3,235,183	-				-1.0
3,235,183	-				+0.1
3,235,183	-				+1.5
3,235,266	+				+0.2
3,235,266	+				-0.1
3,235,266	+				-0.2
3,235,266	+				-0.3
3,235,266	+				-0.2
3,235,266	+				-0.0
3,235,266	+				+0.5
3,235,266	+				+0.1
3,235,266	+				-0.3
3,235,266	+				+1.4
3,235,266	+				+1.7
3,235,266	+				+0.9
3,235,280	+				-2.2
3,235,281	-				-0.2
3,235,310	+				+0.8
3,235,311	-				-0.3
3,235,311	-				-2.3
3,235,311	-				+0.4
3,235,311	-				-1.5
3,235,311	-				+0.1
3,235,311	-				+0.4
3,235,361	+				+1.4
3,235,361	+				-0.3
3,235,362	-				-2.1
3,235,362	-				-0.8
3,235,362	-				-0.3
3,235,362	-				-0.2
3,235,488	-		LRK54_RS14585	0.21	+0.1
3,235,488	-		LRK54_RS14585	0.21	+0.5
3,235,488	-		LRK54_RS14585	0.21	-0.5
3,235,488	-		LRK54_RS14585	0.21	-1.8
3,235,493	+		LRK54_RS14585	0.22	+0.7
3,235,493	+		LRK54_RS14585	0.22	+0.3
3,235,493	+		LRK54_RS14585	0.22	-0.7
3,235,493	+		LRK54_RS14585	0.22	-1.1
3,235,493	+		LRK54_RS14585	0.22	-0.1
3,235,493	+		LRK54_RS14585	0.22	+0.2
3,235,493	+		LRK54_RS14585	0.22	-0.3
3,235,493	+		LRK54_RS14585	0.22	+1.3
3,235,493	+		LRK54_RS14585	0.22	-1.3
3,235,493	+		LRK54_RS14585	0.22	-0.2
3,235,493	+		LRK54_RS14585	0.22	+0.1
3,235,493	+		LRK54_RS14585	0.22	-0.3
3,235,493	+		LRK54_RS14585	0.22	-0.3
3,235,493	+		LRK54_RS14585	0.22	+0.2
3,235,493	+		LRK54_RS14585	0.22	-0.5
3,235,494	-		LRK54_RS14585	0.22	-0.6
3,235,494	-		LRK54_RS14585	0.22	-0.5
3,235,494	-		LRK54_RS14585	0.22	+0.1
3,235,494	-		LRK54_RS14585	0.22	-1.6
3,235,494	-		LRK54_RS14585	0.22	-0.4
3,235,494	-		LRK54_RS14585	0.22	-1.5
3,235,494	-		LRK54_RS14585	0.22	+0.3
3,235,494	-		LRK54_RS14585	0.22	-0.9
3,235,494	-		LRK54_RS14585	0.22	+0.1
3,235,494	-		LRK54_RS14585	0.22	+0.6
3,235,494	-		LRK54_RS14585	0.22	+0.1
3,235,494	-		LRK54_RS14585	0.22	+0.4
3,235,494	-		LRK54_RS14585	0.22	-0.1
3,235,494	-		LRK54_RS14585	0.22	-0.3
3,235,494	-		LRK54_RS14585	0.22	+0.7
3,235,494	-		LRK54_RS14585	0.22	+0.8
3,235,494	-		LRK54_RS14585	0.22	-0.3
3,235,494	-		LRK54_RS14585	0.22	-1.1
3,235,494	-		LRK54_RS14585	0.22	-0.6
3,235,535	+		LRK54_RS14585	0.27	+0.9
3,235,535	+		LRK54_RS14585	0.27	+0.7
3,235,535	+		LRK54_RS14585	0.27	+0.1
3,235,535	+		LRK54_RS14585	0.27	+0.5
3,235,535	+		LRK54_RS14585	0.27	-0.2
3,235,535	+		LRK54_RS14585	0.27	-2.6
3,235,536	-		LRK54_RS14585	0.27	+0.3
3,235,536	-		LRK54_RS14585	0.27	+0.1
3,235,536	-		LRK54_RS14585	0.27	+0.9
3,235,536	-		LRK54_RS14585	0.27	-0.3
3,235,536	-		LRK54_RS14585	0.27	+0.0
3,235,536	-		LRK54_RS14585	0.27	+1.2
3,235,771	+		LRK54_RS14585	0.55	-0.3
3,235,771	+		LRK54_RS14585	0.55	-1.6
3,235,771	+		LRK54_RS14585	0.55	-0.1
3,235,771	+		LRK54_RS14585	0.55	+0.0
3,235,771	+		LRK54_RS14585	0.55	+0.4
3,235,772	-		LRK54_RS14585	0.55	+0.3
3,235,772	-		LRK54_RS14585	0.55	+0.4
3,235,772	-		LRK54_RS14585	0.55	+0.6
3,235,772	-		LRK54_RS14585	0.55	+0.2
3,235,772	-		LRK54_RS14585	0.55	-1.3
3,235,928	+		LRK54_RS14585	0.74	+1.1
3,235,928	+		LRK54_RS14585	0.74	-1.6
3,235,929	-		LRK54_RS14585	0.74	-1.2
3,235,929	-		LRK54_RS14585	0.74	-0.3