Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08840

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,652,486	-		MMP_RS08835	0.30	-1.7
1,652,564	-		MMP_RS08835	0.37	+0.4
1,652,739	-		MMP_RS08835	0.54	-2.0
1,652,740	+		MMP_RS08835	0.54	+1.7
1,652,838	-		MMP_RS08835	0.64	-1.1
1,652,839	+		MMP_RS08835	0.64	-0.9
1,652,845	-		MMP_RS08835	0.65	+1.7
1,652,906	+		MMP_RS08835	0.70	-3.2
1,653,001	-		MMP_RS08835	0.80	-2.8
1,653,041	-		MMP_RS08835	0.84	+0.3
1,653,071	+		MMP_RS08835	0.87	-1.7
1,653,192	-				-3.3
1,653,246	-				+0.6
1,653,260	-				+1.7
1,653,288	-				-2.4
1,653,298	-				+2.3
1,653,299	+				-0.6
1,653,305	-				-0.6
1,653,305	-				-1.3
1,653,306	+				-0.2
1,653,374	-		MMP_RS08840	0.11	-2.6
1,653,375	+		MMP_RS08840	0.11	-3.0
1,653,375	+		MMP_RS08840	0.11	+1.1
1,653,375	+		MMP_RS08840	0.11	-1.8
1,653,382	-		MMP_RS08840	0.12	-1.5
1,653,415	+		MMP_RS08840	0.15	+0.4
1,653,417	-		MMP_RS08840	0.15	-1.6
1,653,418	+		MMP_RS08840	0.15	-0.3
1,653,421	-		MMP_RS08840	0.15	-1.3
1,653,421	-		MMP_RS08840	0.15	-2.3
1,653,422	+		MMP_RS08840	0.16	-1.7
1,653,422	+		MMP_RS08840	0.16	-1.5
1,653,519	+		MMP_RS08840	0.25	-0.5
1,653,665	+		MMP_RS08840	0.39	-5.1
1,653,804	+		MMP_RS08840	0.53	-0.1
1,654,093	-		MMP_RS08840	0.81	-0.6
1,654,147	+		MMP_RS08840	0.86	-3.5
1,654,165	-		MMP_RS08840	0.88	-0.4
1,654,196	+				-3.5
1,654,222	+				-1.1
1,654,265	-				+0.4
1,654,294	+				+0.2
1,654,336	+				-1.2
1,654,567	+		MMP_RS08845	0.69	-1.9
1,654,583	-		MMP_RS08845	0.74	+0.8
1,654,583	-		MMP_RS08845	0.74	-2.6
1,654,583	-		MMP_RS08845	0.74	+1.4
1,654,583	-		MMP_RS08845	0.74	-0.5
1,654,583	-		MMP_RS08845	0.74	+0.4
1,654,584	+		MMP_RS08845	0.74	-0.5
1,654,590	-		MMP_RS08845	0.76	-0.0
1,654,590	-		MMP_RS08845	0.76	+0.2
1,654,591	+		MMP_RS08845	0.76	+0.1
1,654,591	+		MMP_RS08845	0.76	-1.4
1,654,591	+		MMP_RS08845	0.76	-3.0
1,654,593	+		MMP_RS08845	0.77	-0.1
1,654,639	-				-0.9
1,654,658	+				-0.2
1,654,662	+				+0.8
1,654,662	+				-0.4
1,654,717	-				-1.0
1,654,737	+				+1.0
1,654,757	+				-0.5
1,654,757	+				-1.1
1,654,994	+				+0.5
1,655,084	-				-1.8
1,655,084	-				+0.1
1,655,132	+		MMP_RS08850	0.11	+1.4
1,655,173	+		MMP_RS08850	0.13	+0.3
1,655,230	+		MMP_RS08850	0.15	-2.7
1,655,230	+		MMP_RS08850	0.15	+1.5
1,655,268	+		MMP_RS08850	0.16	-1.2
1,655,287	-		MMP_RS08850	0.17	+0.0
1,655,287	-		MMP_RS08850	0.17	+0.1