Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07330

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,394,644	+				+0.9
1,394,692	+				-0.3
1,394,702	+				-1.5
1,394,799	-				-3.0
1,394,985	-				-3.3
1,394,986	+				-4.0
1,395,039	+				-2.7
1,395,421	-				-2.7
1,395,490	+				-1.1
1,395,523	+				-0.1
1,395,523	+				-1.1
1,395,523	+				-1.5
1,395,528	+				-1.6
1,395,554	-				-1.4
1,395,555	+				+1.2
1,395,558	-				-3.0
1,395,558	-				-0.7
1,395,559	+				+0.1
1,395,560	-				-3.5
1,395,561	+				-3.2
1,395,561	+				-1.0
1,395,561	+				+1.7
1,395,561	+				-5.4
1,395,563	+				-3.8
1,395,564	-				-1.0
1,395,564	-				-3.0
1,395,564	-				+0.2
1,395,565	+				-1.8
1,395,565	+				-1.8
1,395,565	+				-0.8
1,395,565	+				-1.1
1,395,758	-				-1.5
1,395,758	-				-1.7
1,395,787	+				-2.6
1,395,787	+				-3.5
1,395,960	+		MMP_RS07330	0.14	-2.5
1,396,053	+		MMP_RS07330	0.17	-1.2
1,396,106	-		MMP_RS07330	0.20	-4.1
1,396,106	-		MMP_RS07330	0.20	-3.2
1,396,107	+		MMP_RS07330	0.20	-2.9
1,396,107	+		MMP_RS07330	0.20	-1.4
1,396,157	+		MMP_RS07330	0.22	+0.4
1,396,158	-		MMP_RS07330	0.22	-1.5
1,396,158	-		MMP_RS07330	0.22	-4.6
1,396,159	+		MMP_RS07330	0.22	-4.8
1,396,159	+		MMP_RS07330	0.22	-3.3
1,396,160	-		MMP_RS07330	0.22	-4.3
1,396,201	-		MMP_RS07330	0.23	-1.8
1,396,213	-		MMP_RS07330	0.24	-5.3
1,396,222	-		MMP_RS07330	0.24	-5.7
1,396,311	-		MMP_RS07330	0.28	-2.7
1,396,370	+		MMP_RS07330	0.30	-4.9
1,396,372	-		MMP_RS07330	0.30	-2.3
1,396,372	-		MMP_RS07330	0.30	-2.8
1,396,373	+		MMP_RS07330	0.30	-3.0
1,396,374	-		MMP_RS07330	0.30	-3.9
1,396,374	-		MMP_RS07330	0.30	-2.8
1,396,383	-		MMP_RS07330	0.30	-2.7
1,396,383	-		MMP_RS07330	0.30	-5.5
1,396,384	+		MMP_RS07330	0.30	-4.2
1,396,394	+		MMP_RS07330	0.31	-1.6
1,396,394	+		MMP_RS07330	0.31	+0.6
1,396,394	+		MMP_RS07330	0.31	-4.2
1,396,439	-		MMP_RS07330	0.33	-2.1
1,396,440	+		MMP_RS07330	0.33	-3.1
1,396,440	+		MMP_RS07330	0.33	-5.2
1,396,445	+		MMP_RS07330	0.33	-3.4
1,396,445	+		MMP_RS07330	0.33	-1.8
1,396,445	+		MMP_RS07330	0.33	-1.5
1,396,445	+		MMP_RS07330	0.33	-2.8
1,396,445	+		MMP_RS07330	0.33	-3.0
1,396,494	+		MMP_RS07330	0.35	-3.8
1,396,496	-		MMP_RS07330	0.35	-3.6
1,396,567	-		MMP_RS07330	0.38	+0.5
1,396,568	+		MMP_RS07330	0.38	-5.7
1,396,568	+		MMP_RS07330	0.38	-3.3
1,396,568	+		MMP_RS07330	0.38	-4.9
1,396,569	-		MMP_RS07330	0.38	-1.1
1,396,570	+		MMP_RS07330	0.38	-2.0
1,396,571	-		MMP_RS07330	0.38	-5.5
1,396,851	+		MMP_RS07330	0.49	-5.9
1,396,882	-		MMP_RS07330	0.50	-1.5
1,396,883	+		MMP_RS07330	0.50	-5.2
1,396,883	+		MMP_RS07330	0.50	-2.1
1,396,883	+		MMP_RS07330	0.50	-5.5
1,396,885	-		MMP_RS07330	0.50	-0.7
1,396,926	+		MMP_RS07330	0.52	-1.7
1,396,951	-		MMP_RS07330	0.53	+1.5
1,396,951	-		MMP_RS07330	0.53	-1.9
1,396,968	-		MMP_RS07330	0.53	-0.0
1,396,969	+		MMP_RS07330	0.53	-3.1
1,396,986	-		MMP_RS07330	0.54	+2.4
1,397,012	+		MMP_RS07330	0.55	-2.6
1,397,023	+		MMP_RS07330	0.55	-1.2
1,397,039	+		MMP_RS07330	0.56	-0.5
1,397,375	-		MMP_RS07330	0.69	-1.7
1,397,391	-		MMP_RS07330	0.70	-0.5
1,397,391	-		MMP_RS07330	0.70	-4.4
1,397,411	+		MMP_RS07330	0.71	-3.0
1,397,439	+		MMP_RS07330	0.72	-3.8
1,397,439	+		MMP_RS07330	0.72	-1.3
1,397,444	+		MMP_RS07330	0.72	-1.5
1,397,462	+		MMP_RS07330	0.73	-1.3
1,397,493	+		MMP_RS07330	0.74	-0.5
1,397,497	-		MMP_RS07330	0.74	-3.2
1,397,589	-		MMP_RS07330	0.77	-3.4
1,397,590	+		MMP_RS07330	0.78	-2.3
1,397,590	+		MMP_RS07330	0.78	+0.2
1,397,606	-		MMP_RS07330	0.78	-1.9
1,397,646	+		MMP_RS07330	0.80	-2.9
1,397,733	+		MMP_RS07330	0.83	-1.6
1,397,742	-		MMP_RS07330	0.83	-3.8
1,397,743	+		MMP_RS07330	0.84	-2.2
1,397,747	+		MMP_RS07330	0.84	-0.8
1,397,753	+		MMP_RS07330	0.84	-4.0
1,397,769	-		MMP_RS07330	0.85	-0.7
1,398,020	-				-2.5
1,398,021	+				-1.3
1,398,136	-				-5.9
1,398,163	+				-1.0
1,398,206	+				-1.5
1,398,291	+				-2.0
1,398,333	-		MMP_RS07335	0.10	+2.0
1,398,348	+		MMP_RS07335	0.13	+0.2
1,398,512	-		MMP_RS07335	0.44	+0.8
1,398,513	+		MMP_RS07335	0.44	-1.1
1,398,515	-		MMP_RS07335	0.44	+0.6
1,398,516	+		MMP_RS07335	0.44	+3.0
1,398,523	+		MMP_RS07335	0.46	+0.4
1,398,652	-		MMP_RS07335	0.69	-3.7
1,398,838	+				-0.8
1,398,838	+				-1.5
1,398,847	-				-2.3
1,398,871	+				-3.0
1,399,001	+				-2.8