Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07140

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,365,035	-				-1.5
1,365,040	-				+0.2
1,365,040	-				+1.8
1,365,040	-				+1.3
1,365,098	-				+1.4
1,365,188	-		MMP_RS07135	0.13	-5.8
1,365,262	+		MMP_RS07135	0.22	-0.0
1,365,304	+		MMP_RS07135	0.27	+0.8
1,365,459	+		MMP_RS07135	0.45	+1.6
1,365,463	+		MMP_RS07135	0.46	+3.0
1,365,470	-		MMP_RS07135	0.46	+0.7
1,365,494	+		MMP_RS07135	0.49	+1.3
1,365,494	+		MMP_RS07135	0.49	+1.2
1,365,494	+		MMP_RS07135	0.49	-2.1
1,365,502	+		MMP_RS07135	0.50	+0.6
1,365,587	+		MMP_RS07135	0.60	-1.8
1,365,659	-		MMP_RS07135	0.69	-4.4
1,365,659	-		MMP_RS07135	0.69	+0.5
1,365,664	+		MMP_RS07135	0.69	+2.1
1,365,671	+		MMP_RS07135	0.70	-0.8
1,365,885	+				+0.1
1,365,922	-				-1.6
1,365,976	+				+1.5
1,365,976	+				+1.3
1,365,979	+				-2.2
1,365,982	-				-4.2
1,365,983	+				-0.9
1,365,993	-				-0.1
1,366,031	+				+0.3
1,366,058	+				+0.6
1,366,058	+				+0.1
1,366,058	+				+1.4
1,366,058	+				-1.3
1,366,058	+				+0.6
1,366,120	+				+1.0
1,366,151	+		MMP_RS07140	0.12	+0.1
1,366,153	+		MMP_RS07140	0.12	+0.7
1,366,157	-		MMP_RS07140	0.12	-2.4
1,366,162	+		MMP_RS07140	0.13	+0.6
1,366,166	-		MMP_RS07140	0.13	-0.0
1,366,166	-		MMP_RS07140	0.13	+1.0
1,366,206	+		MMP_RS07140	0.17	-3.6
1,366,220	+		MMP_RS07140	0.19	+0.6
1,366,309	+		MMP_RS07140	0.27	+0.8
1,366,467	+		MMP_RS07140	0.43	+2.0
1,366,571	-		MMP_RS07140	0.53	+0.9
1,366,572	+		MMP_RS07140	0.53	-0.1
1,366,577	-		MMP_RS07140	0.54	-1.4
1,366,584	+		MMP_RS07140	0.55	+1.2
1,366,611	+		MMP_RS07140	0.57	+0.8
1,366,616	-		MMP_RS07140	0.58	+1.2
1,366,616	-		MMP_RS07140	0.58	-0.3
1,366,616	-		MMP_RS07140	0.58	-0.9
1,366,617	+		MMP_RS07140	0.58	+1.3
1,366,617	+		MMP_RS07140	0.58	-0.5
1,366,617	+		MMP_RS07140	0.58	+1.1
1,366,617	+		MMP_RS07140	0.58	-3.3
1,366,638	+		MMP_RS07140	0.60	+0.1
1,366,638	+		MMP_RS07140	0.60	+2.1
1,366,656	+		MMP_RS07140	0.62	-1.0
1,366,716	+		MMP_RS07140	0.68	-0.6
1,366,749	-		MMP_RS07140	0.71	-5.6
1,366,813	-		MMP_RS07140	0.77	+0.8
1,366,813	-		MMP_RS07140	0.77	+1.2
1,366,814	+		MMP_RS07140	0.77	+0.8
1,366,814	+		MMP_RS07140	0.77	+1.0
1,366,818	+		MMP_RS07140	0.78	+1.8
1,366,841	-		MMP_RS07140	0.80	+0.8
1,366,841	-		MMP_RS07140	0.80	+1.0
1,366,846	+		MMP_RS07140	0.81	+0.6
1,366,854	-		MMP_RS07140	0.81	+0.1
1,366,855	+		MMP_RS07140	0.82	+0.9
1,366,856	-		MMP_RS07140	0.82	+0.8
1,366,913	+		MMP_RS07140	0.87	+1.5
1,366,914	-		MMP_RS07140	0.87	-1.2
1,366,915	+		MMP_RS07140	0.88	+1.4
1,366,964	-				+0.2
1,366,985	-				-0.6
1,366,998	-				+1.0
1,367,009	-				+0.9
1,367,034	+				+0.7
1,367,055	+				+0.2
1,367,069	+				+0.8
1,367,087	+				-0.4
1,367,253	+		MMP_RS07145	0.19	+0.3
1,367,254	-		MMP_RS07145	0.20	-1.6
1,367,255	+		MMP_RS07145	0.20	+1.1
1,367,259	+		MMP_RS07145	0.20	+1.2
1,367,328	-		MMP_RS07145	0.28	+0.6
1,367,435	+		MMP_RS07145	0.41	+0.2
1,367,538	-		MMP_RS07145	0.53	+0.1
1,367,572	-		MMP_RS07145	0.57	-3.2
1,367,572	-		MMP_RS07145	0.57	+1.0
1,367,573	+		MMP_RS07145	0.57	+0.5
1,367,600	+		MMP_RS07145	0.60	+0.1
1,367,612	-		MMP_RS07145	0.61	-0.2
1,367,775	-		MMP_RS07145	0.80	+1.1
1,367,786	+		MMP_RS07145	0.82	-1.1
1,367,788	+		MMP_RS07145	0.82	+0.4
1,367,954	-				+0.6
1,367,967	-				+1.5
1,367,976	+				+1.4
1,368,010	-				+1.0