Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05285

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,009,995	+		MMP_RS05280	0.36	-0.8
1,010,005	+		MMP_RS05280	0.37	-1.9
1,010,250	+		MMP_RS05280	0.52	-1.6
1,010,313	+		MMP_RS05280	0.56	-2.7
1,010,316	-		MMP_RS05280	0.57	-3.1
1,010,316	-		MMP_RS05280	0.57	-3.1
1,010,491	-		MMP_RS05280	0.68	-5.1
1,010,575	-		MMP_RS05280	0.73	-1.7
1,010,577	-		MMP_RS05280	0.73	-0.8
1,010,577	-		MMP_RS05280	0.73	-2.5
1,010,592	-		MMP_RS05280	0.74	-3.6
1,010,709	-		MMP_RS05280	0.82	-1.9
1,010,736	+		MMP_RS05280	0.83	-2.2
1,010,781	+		MMP_RS05280	0.86	-2.3
1,010,810	-		MMP_RS05280	0.88	-3.8
1,010,816	-		MMP_RS05280	0.88	-1.6
1,011,228	-		MMP_RS05285	0.20	-2.8
1,011,228	-		MMP_RS05285	0.20	-2.6
1,011,243	-		MMP_RS05285	0.22	-3.3
1,011,328	+		MMP_RS05285	0.29	-4.2
1,011,460	-		MMP_RS05285	0.40	-4.7
1,011,469	+		MMP_RS05285	0.41	-1.0
1,011,670	-		MMP_RS05285	0.58	-1.3
1,011,747	-		MMP_RS05285	0.65	-1.5
1,011,784	-		MMP_RS05285	0.68	-3.6
1,011,784	-		MMP_RS05285	0.68	-5.4
1,011,785	+		MMP_RS05285	0.68	-2.5
1,011,828	+		MMP_RS05285	0.72	-1.9
1,011,944	-		MMP_RS05285	0.82	-2.6
1,012,174	+				-1.4
1,012,197	-				+0.5
1,012,217	-				-0.3
1,012,226	-				-2.1
1,012,280	+				-0.7
1,012,280	+				-2.8
1,012,280	+				-0.9
1,012,280	+				-2.9
1,012,462	-		MMP_RS05290	0.37	-2.5
1,012,462	-		MMP_RS05290	0.37	-1.0
1,012,499	-		MMP_RS05290	0.43	+0.0
1,012,500	+		MMP_RS05290	0.43	-1.2
1,012,500	+		MMP_RS05290	0.43	-2.0
1,012,505	+		MMP_RS05290	0.44	-3.3
1,012,538	+		MMP_RS05290	0.49	-2.4
1,012,551	+		MMP_RS05290	0.51	-1.3
1,012,581	+		MMP_RS05290	0.56	-3.8
1,012,583	-		MMP_RS05290	0.57	-0.9
1,012,622	-		MMP_RS05290	0.63	-1.1
1,012,622	-		MMP_RS05290	0.63	+0.1
1,012,708	-		MMP_RS05290	0.77	-1.1
1,012,715	+		MMP_RS05290	0.79	-0.7
1,012,745	+		MMP_RS05290	0.84	-1.6
1,012,769	-		MMP_RS05290	0.88	+0.4
1,012,786	+				-0.2
1,012,837	-				+0.2
1,012,837	-				-1.0
1,012,838	+				-4.9
1,012,847	+				-1.4
1,012,851	-				-2.3
1,012,851	-				+0.4
1,012,851	-				-3.1
1,012,865	-				-1.6
1,012,866	+				-1.2
1,012,874	-				-1.9
1,012,874	-				-0.4
1,012,874	-				-5.1
1,012,888	-				-1.9
1,012,892	-				-0.6
1,012,900	-				+1.7
1,012,900	-				+1.2
1,012,940	+				-2.8
1,012,961	-				-2.5
1,012,962	+				+0.7
1,012,966	-				+2.1
1,012,966	-				-2.3
1,012,967	+				-1.6
1,012,971	-				+0.4
1,012,992	+				-3.5