Strain Fitness in Methanococcus maripaludis S2 around MMP_RS03845

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
726,956	-		MMP_RS03835	0.71	-0.5
726,957	+		MMP_RS03835	0.71	+0.1
726,985	+		MMP_RS03835	0.73	+2.3
727,027	+		MMP_RS03835	0.76	+0.5
727,045	-		MMP_RS03835	0.77	-2.1
727,045	-		MMP_RS03835	0.77	+1.1
727,052	-		MMP_RS03835	0.78	+0.7
727,052	-		MMP_RS03835	0.78	+0.6
727,052	-		MMP_RS03835	0.78	+1.0
727,053	+		MMP_RS03835	0.78	+0.5
727,053	+		MMP_RS03835	0.78	+0.6
727,058	+		MMP_RS03835	0.78	+0.5
727,070	+		MMP_RS03835	0.79	+0.2
727,120	-		MMP_RS03835	0.83	+0.5
727,147	+		MMP_RS03835	0.85	-4.4
727,161	-		MMP_RS03835	0.86	+0.2
727,234	-				+2.1
727,263	-				+1.1
727,266	-				-1.1
727,314	-				-0.7
727,314	-				+0.1
727,315	+				-0.6
727,350	-				+2.8
727,382	+				+0.3
727,391	-				+0.2
727,429	-				-1.1
727,429	-				-2.3
727,429	-				-0.4
727,430	+				+0.4
727,431	-				-0.0
727,431	-				+0.1
727,431	-				-0.5
727,431	-				-3.8
727,431	-				-0.3
727,432	+				+0.4
727,432	+				-0.4
727,432	+				-0.0
727,433	-				-1.0
727,433	-				+1.1
727,433	-				+0.1
727,433	-				-2.1
727,433	-				-0.9
727,434	+				+0.6
727,434	+				-4.9
727,434	+				-1.9
727,434	+				-0.8
727,468	-				+1.6
727,469	+				-0.0
727,469	+				+0.5
727,469	+				+1.1
727,484	-				+0.1
727,485	+				+0.5
727,485	+				-0.2
727,485	+				-0.0
727,485	+				+1.4
727,486	-				-1.3
727,486	-				-4.4
727,486	-				-0.1
727,497	+				+1.4
727,528	+		MMP_RS03840	0.13	+0.9
727,564	-		MMP_RS03840	0.24	+0.0
727,656	-		MMP_RS03840	0.53	-0.3
727,781	+				-2.8
727,782	-				-0.5
727,810	-				-0.3
727,848	+				-0.2
727,873	-				+0.8
727,878	-				+1.3
727,879	+				-0.4
728,024	+		MMP_RS03845	0.16	+0.4
728,075	-		MMP_RS03845	0.21	+0.9
728,198	+		MMP_RS03845	0.35	+1.1
728,219	+		MMP_RS03845	0.37	+1.2
728,323	+		MMP_RS03845	0.48	-0.7
728,382	+		MMP_RS03845	0.55	-2.0
728,472	+		MMP_RS03845	0.64	+0.4
728,583	+		MMP_RS03845	0.76	-2.5
728,602	+		MMP_RS03845	0.79	-1.5
728,626	-		MMP_RS03845	0.81	-1.6
728,627	+		MMP_RS03845	0.81	-1.1
728,627	+		MMP_RS03845	0.81	-0.0
728,640	-		MMP_RS03845	0.83	-1.1
728,641	+		MMP_RS03845	0.83	-4.1
728,658	-		MMP_RS03845	0.85	+0.3
728,704	+		MMP_RS03845	0.90	-1.0
728,777	-				-3.1
728,823	-				-0.1
728,823	-				-0.9
728,823	-				+0.3
728,824	+				-0.2
728,951	+		MMP_RS08990	0.73	-0.5
728,952	-		MMP_RS08990	0.73	-0.2
728,952	-		MMP_RS08990	0.73	-2.2
728,953	+		MMP_RS08990	0.74	+0.5
728,984	-				+0.1
728,985	+				-2.9
728,985	+				-1.9
728,985	+				-0.5
728,997	-				+0.5
728,997	-				+1.7
728,998	+				+0.1
728,998	+				+0.6
728,998	+				-0.8
729,003	+				-0.3
729,033	-				+0.1
729,034	+				+2.2
729,042	-				+0.5
729,042	-				+0.2
729,042	-				+0.6
729,047	-				+1.6
729,047	-				+2.1
729,048	+				-1.0
729,070	-				+1.7
729,076	+				-4.4
729,080	-				-1.1
729,089	-				-4.1
729,120	+				-3.0
729,120	+				-0.2
729,168	+				-3.5
729,178	-				-4.4
729,180	-				-2.5
729,180	-				-3.7
729,181	+				-3.4
729,181	+				-1.4
729,219	+				-1.5
729,384	+				+1.1
729,387	-				-2.5
729,388	+				-2.7
729,419	+				-2.9
729,755	+				-3.9
729,760	-				-3.9