Strain Fitness in Methanococcus maripaludis S2 around MMP_RS03540

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
662,064	+		MMP_RS03530	0.59	-0.1
662,170	-		MMP_RS03530	0.67	-0.2
662,420	+		MMP_RS03530	0.88	-3.6
662,420	+		MMP_RS03530	0.88	-2.2
662,468	-				+0.5
662,496	-				+0.5
662,497	+				+0.9
662,499	-				+0.2
662,527	-				+0.3
662,558	+				+0.3
662,573	-				+0.5
662,592	+				+1.0
662,600	+				+0.0
662,629	-				+1.1
662,802	-				-0.8
662,803	+				-0.1
662,824	-				-2.4
662,833	+				+0.8
662,840	-		MMP_RS03535	0.13	+0.9
662,841	+		MMP_RS03535	0.14	-1.0
662,841	+		MMP_RS03535	0.14	+0.2
663,020	-				-1.0
663,029	+				-0.7
663,050	-				-2.7
663,059	+				-1.0
663,059	+				-0.7
663,059	+				-1.8
663,062	-				-1.6
663,125	-		MMP_RS03540	0.25	-2.1
663,272	-		MMP_RS03540	0.63	-2.4
663,300	-		MMP_RS03540	0.71	-2.2
663,302	-		MMP_RS03540	0.71	-0.1
663,303	+		MMP_RS03540	0.71	-0.3
663,306	-		MMP_RS03540	0.72	+1.6
663,309	-		MMP_RS03540	0.73	+1.9
663,310	+		MMP_RS03540	0.73	+1.8
663,323	+		MMP_RS03540	0.76	+0.2
663,370	+		MMP_RS03540	0.89	-0.4
663,523	-				+0.6
663,573	-				+1.0
663,573	-				+0.8
663,573	-				+1.4
663,573	-				-0.1
663,576	+				-2.6
663,906	-		MMP_RS03545	0.25	+0.3
663,994	+		MMP_RS03545	0.32	+0.5
664,021	-		MMP_RS03545	0.34	-1.6
664,239	-		MMP_RS03545	0.49	-0.6
664,295	+		MMP_RS03545	0.53	+1.5
664,297	-		MMP_RS03545	0.53	+0.4