Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00635

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
114,808	-		MMP_RS00625	0.63	-0.2
114,880	+		MMP_RS00625	0.76	-0.4
114,963	+				-0.1
114,963	+				+1.1
114,964	-				-5.2
114,965	+				-1.2
114,965	+				+0.7
115,069	+				+0.6
115,073	+				+0.5
115,073	+				+0.6
115,135	-				-0.4
115,135	-				+0.0
115,136	+				-0.9
115,326	-		MMP_RS00630	0.37	-0.1
115,344	+		MMP_RS00630	0.40	-0.5
115,615	-		MMP_RS00630	0.89	-0.7
115,616	+		MMP_RS00630	0.89	+0.8
115,616	+		MMP_RS00630	0.89	-1.8
115,618	-		MMP_RS00630	0.89	-1.2
115,618	-		MMP_RS00630	0.89	+1.6
115,619	+		MMP_RS00630	0.89	+0.5
115,676	+				+0.0
115,851	+		MMP_RS00635	0.31	+0.0
115,890	-		MMP_RS00635	0.39	-0.7
115,901	+		MMP_RS00635	0.41	+0.6
115,916	+		MMP_RS00635	0.44	+0.7
116,158	-		MMP_RS00635	0.90	+0.8
116,159	+				+1.4
116,271	+				-3.1
116,329	+				+0.4
116,347	-				+0.4
116,350	-				-3.0
116,435	-				-0.1
116,671	+		MMP_RS00640	0.31	+1.2
116,761	-		MMP_RS00640	0.40	-5.4
116,821	-		MMP_RS00640	0.45	+0.3
116,835	-		MMP_RS00640	0.47	-1.0
116,849	+		MMP_RS00640	0.48	-1.4
116,883	-		MMP_RS00640	0.51	+1.3
116,883	-		MMP_RS00640	0.51	-1.1
116,889	+		MMP_RS00640	0.52	-1.1
116,893	-		MMP_RS00640	0.52	-1.8
116,894	+		MMP_RS00640	0.53	+1.4
116,894	+		MMP_RS00640	0.53	-0.2
117,032	+		MMP_RS00640	0.66	+2.3