Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08460
Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM |
---|---|---|---|---|---|
remove | |||||
1,586,508 | + | -2.6 | |||
1,586,569 | + | -2.4 | |||
1,586,711 | + | +0.7 | |||
1,586,711 | + | +1.4 | |||
1,586,845 | - | MMP_RS08455 | 0.26 | +0.8 | |
1,587,004 | + | MMP_RS08455 | 0.59 | +1.2 | |
1,587,030 | - | MMP_RS08455 | 0.65 | +0.7 | |
1,587,062 | + | MMP_RS08455 | 0.71 | +0.7 | |
1,587,163 | + | +0.0 | |||
1,587,203 | + | -0.5 | |||
1,587,253 | - | -3.3 | |||
1,587,258 | + | -0.7 | |||
1,587,330 | + | +1.3 | |||
1,587,330 | + | -1.4 | |||
1,587,332 | + | +1.3 | |||
1,587,333 | - | -2.5 | |||
1,587,334 | + | +0.8 | |||
1,587,336 | - | -1.8 | |||
1,587,337 | + | +0.7 | |||
1,587,351 | + | -2.2 | |||
1,587,369 | + | +0.9 | |||
1,587,376 | - | +1.2 | |||
1,587,377 | + | -2.6 | |||
1,587,379 | + | +1.6 | |||
1,587,463 | + | -1.5 | |||
1,587,465 | + | -0.2 | |||
1,587,723 | + | MMP_RS08460 | 0.18 | -3.5 | |
1,587,728 | + | MMP_RS08460 | 0.18 | -1.5 | |
1,587,770 | - | MMP_RS08460 | 0.22 | -3.3 | |
1,588,242 | + | MMP_RS08460 | 0.60 | -1.9 | |
1,588,367 | + | MMP_RS08460 | 0.71 | -2.5 | |
1,588,529 | + | MMP_RS08460 | 0.84 | -1.2 | |
1,588,729 | - | -1.8 | |||
1,589,275 | - | -3.7 | |||
1,589,453 | - | -0.2 | |||
1,589,456 | + | -2.6 | |||
1,589,461 | - | -2.1 | |||
1,589,726 | + | -2.5 |
Or see this region's nucleotide sequence