Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08380
Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM |
|---|---|---|---|---|---|
| remove | |||||
| 1,573,472 | - | -3.2 | |||
| 1,573,694 | + | -2.2 | |||
| 1,573,762 | - | +1.1 | |||
| 1,574,399 | - | +1.5 | |||
| 1,574,425 | + | +0.4 | |||
| 1,574,434 | + | -2.2 | |||
| 1,574,509 | + | MMP_RS08380 | 0.20 | +2.9 | |
| 1,574,569 | - | MMP_RS08380 | 0.31 | -0.3 | |
| 1,574,724 | + | MMP_RS08380 | 0.59 | +1.6 | |
| 1,574,749 | - | MMP_RS08380 | 0.64 | +0.4 | |
| 1,574,835 | + | MMP_RS08380 | 0.80 | +0.5 | |
| 1,574,836 | - | MMP_RS08380 | 0.80 | +1.6 | |
| 1,575,011 | + | -0.3 | |||
| 1,575,037 | + | +1.2 | |||
| 1,575,056 | - | +0.8 | |||
| 1,575,163 | - | -1.4 | |||
| 1,575,223 | - | MMP_RS08385 | 0.16 | -2.9 | |
| 1,575,272 | - | MMP_RS08385 | 0.22 | +0.5 | |
| 1,575,326 | - | MMP_RS08385 | 0.30 | +0.3 | |
| 1,575,405 | - | MMP_RS08385 | 0.41 | +1.7 | |
| 1,575,556 | - | MMP_RS08385 | 0.62 | +0.4 | |
| 1,575,556 | - | MMP_RS08385 | 0.62 | +1.0 | |
| 1,575,604 | - | MMP_RS08385 | 0.68 | +0.3 | |
| 1,575,622 | + | MMP_RS08385 | 0.71 | -1.8 | |
| 1,575,752 | + | MMP_RS08385 | 0.89 | -2.6 | |
| 1,575,919 | - | +2.8 | |||
| 1,575,919 | - | +1.1 | |||
| 1,575,931 | - | +1.0 | |||
| 1,575,931 | - | -1.0 |
Or see this region's nucleotide sequence