Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07135

Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
1,364,098	-		MMP_RS07125	0.54	+0.4
1,364,176	+		MMP_RS07125	0.68	+0.9
1,364,308	+				-0.7
1,364,381	-				-1.8
1,364,508	+		MMP_RS07130	0.22	+1.0
1,364,513	-		MMP_RS07130	0.23	+1.3
1,364,594	-		MMP_RS07130	0.35	+1.5
1,364,598	+		MMP_RS07130	0.35	-1.5
1,364,631	-		MMP_RS07130	0.40	+1.4
1,364,753	-		MMP_RS07130	0.58	-1.6
1,364,754	+		MMP_RS07130	0.58	+0.2
1,364,798	-		MMP_RS07130	0.64	-1.1
1,364,798	-		MMP_RS07130	0.64	+0.7
1,364,807	+		MMP_RS07130	0.66	+0.6
1,364,928	+		MMP_RS07130	0.83	+1.8
1,364,928	+		MMP_RS07130	0.83	+0.0
1,364,932	+		MMP_RS07130	0.84	+2.0
1,365,035	-				-0.0
1,365,040	-				+1.1
1,365,040	-				-0.2
1,365,040	-				+0.9
1,365,098	-				-0.5
1,365,188	-		MMP_RS07135	0.13	-1.5
1,365,262	+		MMP_RS07135	0.22	-1.4
1,365,304	+		MMP_RS07135	0.27	+0.9
1,365,459	+		MMP_RS07135	0.45	+1.3
1,365,463	+		MMP_RS07135	0.46	+2.5
1,365,470	-		MMP_RS07135	0.46	+0.8
1,365,494	+		MMP_RS07135	0.49	+1.6
1,365,494	+		MMP_RS07135	0.49	-1.4
1,365,494	+		MMP_RS07135	0.49	-1.8
1,365,502	+		MMP_RS07135	0.50	+1.4
1,365,587	+		MMP_RS07135	0.60	+0.2
1,365,659	-		MMP_RS07135	0.69	-1.3
1,365,659	-		MMP_RS07135	0.69	+0.7
1,365,664	+		MMP_RS07135	0.69	+1.5
1,365,671	+		MMP_RS07135	0.70	-0.3
1,365,885	+				+3.2
1,365,922	-				+1.1
1,365,976	+				+1.9
1,365,976	+				+0.7
1,365,979	+				+3.0
1,365,982	-				+1.3
1,365,983	+				-0.3
1,365,993	-				+2.1
1,366,031	+				-0.1
1,366,058	+				+0.0
1,366,058	+				+1.8
1,366,058	+				+2.0
1,366,058	+				+1.0
1,366,058	+				+1.7
1,366,120	+				+1.3
1,366,151	+		MMP_RS07140	0.12	-2.8
1,366,153	+		MMP_RS07140	0.12	-1.0
1,366,157	-		MMP_RS07140	0.12	-1.4
1,366,162	+		MMP_RS07140	0.13	-0.1
1,366,166	-		MMP_RS07140	0.13	-1.2
1,366,166	-		MMP_RS07140	0.13	-1.0
1,366,206	+		MMP_RS07140	0.17	-2.3
1,366,220	+		MMP_RS07140	0.19	-0.2
1,366,309	+		MMP_RS07140	0.27	+0.5
1,366,467	+		MMP_RS07140	0.43	+1.3
1,366,571	-		MMP_RS07140	0.53	+0.6
1,366,572	+		MMP_RS07140	0.53	+1.1
1,366,577	-		MMP_RS07140	0.54	+1.4
1,366,584	+		MMP_RS07140	0.55	-0.7
1,366,611	+		MMP_RS07140	0.57	+0.3
1,366,616	-		MMP_RS07140	0.58	+0.5
1,366,616	-		MMP_RS07140	0.58	-0.1
1,366,616	-		MMP_RS07140	0.58	-0.5
1,366,617	+		MMP_RS07140	0.58	+0.8
1,366,617	+		MMP_RS07140	0.58	-2.9
1,366,617	+		MMP_RS07140	0.58	+0.5
1,366,617	+		MMP_RS07140	0.58	-0.9
1,366,638	+		MMP_RS07140	0.60	+1.3
1,366,638	+		MMP_RS07140	0.60	-0.5
1,366,656	+		MMP_RS07140	0.62	-0.5
1,366,716	+		MMP_RS07140	0.68	-0.3
1,366,749	-		MMP_RS07140	0.71	-1.4
1,366,813	-		MMP_RS07140	0.77	+0.9
1,366,813	-		MMP_RS07140	0.77	+1.7
1,366,814	+		MMP_RS07140	0.77	+0.1
1,366,814	+		MMP_RS07140	0.77	-0.9
1,366,818	+		MMP_RS07140	0.78	-0.8
1,366,841	-		MMP_RS07140	0.80	+0.0
1,366,841	-		MMP_RS07140	0.80	+0.2
1,366,846	+		MMP_RS07140	0.81	-0.6
1,366,854	-		MMP_RS07140	0.81	+0.6
1,366,855	+		MMP_RS07140	0.82	-0.8
1,366,856	-		MMP_RS07140	0.82	+1.0
1,366,913	+		MMP_RS07140	0.87	-0.7
1,366,914	-		MMP_RS07140	0.87	+2.4
1,366,915	+		MMP_RS07140	0.88	+0.5