Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05575

Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
1,068,127	-				-0.2
1,068,127	-				-0.7
1,068,155	-				-1.7
1,068,323	+				-1.6
1,068,326	-				-0.9
1,068,327	+				-0.3
1,068,327	+				-1.9
1,068,375	+				-0.9
1,068,541	+				-3.6
1,068,548	-				-2.8
1,068,549	+				-2.9
1,068,549	+				-2.1
1,068,549	+				-1.4
1,068,568	-				+1.4
1,068,569	+				-1.6
1,068,572	-				-1.3
1,068,573	+				+0.6
1,068,574	-				-1.8
1,068,574	-				-1.9
1,068,574	-				-1.6
1,068,574	-				+1.1
1,068,641	-				+1.2
1,068,676	-				+1.8
1,068,683	-				-1.3
1,068,687	-				-0.7
1,068,687	-				+1.2
1,068,791	-		MMP_RS05575	0.20	-1.5
1,068,827	-		MMP_RS05575	0.24	-0.4
1,068,851	+		MMP_RS05575	0.26	+0.3
1,069,044	-		MMP_RS05575	0.47	-0.2
1,069,045	+		MMP_RS05575	0.47	+1.6
1,069,071	+		MMP_RS05575	0.50	+1.4
1,069,071	+		MMP_RS05575	0.50	-0.1
1,069,076	+		MMP_RS05575	0.50	-2.3
1,069,084	+		MMP_RS05575	0.51	-0.1
1,069,088	-		MMP_RS05575	0.51	-0.1
1,069,091	+		MMP_RS05575	0.52	+1.5
1,069,091	+		MMP_RS05575	0.52	+2.6
1,069,095	+		MMP_RS05575	0.52	-0.4
1,069,105	-		MMP_RS05575	0.53	-0.0
1,069,120	-		MMP_RS05575	0.55	-2.3
1,069,261	+		MMP_RS05575	0.70	-1.3
1,069,323	-		MMP_RS05575	0.76	-1.7
1,069,324	+		MMP_RS05575	0.76	-0.9
1,069,351	+		MMP_RS05575	0.79	-2.3
1,069,352	-		MMP_RS05575	0.79	-1.5
1,069,352	-		MMP_RS05575	0.79	+1.1
1,069,355	-		MMP_RS05575	0.80	+0.5
1,069,356	+		MMP_RS05575	0.80	+0.2
1,069,415	+		MMP_RS05575	0.86	-0.5
1,069,444	-		MMP_RS05575	0.89	-1.4
1,069,450	-		MMP_RS05575	0.90	-2.4
1,069,451	+		MMP_RS05575	0.90	+0.1
1,069,468	-				+3.9
1,069,469	+				+0.6
1,069,469	+				-1.0
1,069,473	-				+1.2
1,069,474	+				+1.5
1,069,474	+				+0.8
1,069,478	-				+1.0
1,069,479	+				-4.0
1,069,496	-				+1.2
1,069,496	-				+1.3
1,069,496	-				+1.3
1,069,500	-				+0.9
1,069,501	+				-0.4
1,069,501	+				-0.6
1,069,546	+				-2.4
1,069,550	-				-1.1
1,069,550	-				-1.5
1,069,592	-				-1.7
1,069,666	-		MMP_RS05580	0.14	-1.6
1,069,683	+		MMP_RS05580	0.16	+1.3
1,069,704	+		MMP_RS05580	0.19	-2.1
1,069,705	-		MMP_RS05580	0.19	+0.9
1,069,713	-		MMP_RS05580	0.20	-1.1
1,069,739	-		MMP_RS05580	0.23	-2.5
1,069,742	+		MMP_RS05580	0.24	+0.6
1,069,763	+		MMP_RS05580	0.26	-1.9
1,069,780	+		MMP_RS05580	0.28	-0.1
1,069,780	+		MMP_RS05580	0.28	+0.7
1,069,780	+		MMP_RS05580	0.28	-2.0
1,069,780	+		MMP_RS05580	0.28	-0.4
1,069,781	-		MMP_RS05580	0.28	-0.5
1,069,781	-		MMP_RS05580	0.28	-1.7
1,069,782	+		MMP_RS05580	0.29	-1.3
1,069,782	+		MMP_RS05580	0.29	-0.5
1,069,782	+		MMP_RS05580	0.29	-0.6
1,069,782	+		MMP_RS05580	0.29	-2.8
1,069,784	-		MMP_RS05580	0.29	+1.0
1,069,784	-		MMP_RS05580	0.29	+0.2
1,069,784	-		MMP_RS05580	0.29	-0.5
1,069,784	-		MMP_RS05580	0.29	-1.3
1,069,785	+		MMP_RS05580	0.29	-0.5
1,069,785	+		MMP_RS05580	0.29	-0.4
1,069,785	+		MMP_RS05580	0.29	+0.9
1,069,785	+		MMP_RS05580	0.29	+0.5
1,069,785	+		MMP_RS05580	0.29	-2.0
1,069,792	-		MMP_RS05580	0.30	-1.1
1,069,793	+		MMP_RS05580	0.30	+3.4
1,069,849	-		MMP_RS05580	0.37	-0.8
1,069,865	+		MMP_RS05580	0.39	+1.3
1,069,868	-		MMP_RS05580	0.39	-1.4
1,069,868	-		MMP_RS05580	0.39	+1.0
1,069,870	-		MMP_RS05580	0.39	-2.6
1,069,882	+		MMP_RS05580	0.41	+1.0
1,069,929	-		MMP_RS05580	0.47	+0.2
1,069,982	-		MMP_RS05580	0.53	-2.3
1,069,983	+		MMP_RS05580	0.53	-0.5
1,069,989	+		MMP_RS05580	0.54	-1.4
1,069,992	+		MMP_RS05580	0.54	-0.7
1,070,079	-		MMP_RS05580	0.65	-2.3
1,070,079	-		MMP_RS05580	0.65	-0.4
1,070,080	+		MMP_RS05580	0.65	-1.1
1,070,080	+		MMP_RS05580	0.65	-2.7
1,070,112	+		MMP_RS05580	0.69	+0.7
1,070,132	-		MMP_RS05580	0.72	-1.0
1,070,133	+		MMP_RS05580	0.72	-3.6
1,070,133	+		MMP_RS05580	0.72	-3.6
1,070,216	+		MMP_RS05580	0.82	-1.2
1,070,219	-		MMP_RS05580	0.82	+0.5
1,070,223	+		MMP_RS05580	0.83	-1.4
1,070,332	-				-2.9
1,070,333	+				-0.7
1,070,333	+				-0.2
1,070,335	-				-1.9
1,070,346	-				-1.0
1,070,347	+				+0.4
1,070,348	-				+1.1
1,070,348	-				-0.6
1,070,348	-				-0.7
1,070,359	+				-0.1
1,070,370	-				-1.9
1,070,373	-				+1.0
1,070,429	-				-0.8
1,070,438	+				-2.1
1,070,466	-				-0.3
1,070,470	+				-1.1
1,070,478	-				-0.3
1,070,479	+				+0.1
1,070,479	+				-3.4