Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05095

Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS05090 and MMP_RS05095 are separated by 11 nucleotidesMMP_RS05095 and MMP_RS05100 are separated by 9 nucleotides MMP_RS05090: MMP_RS05090 - CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta, at 968,128 to 969,501 _RS05090 MMP_RS05095: MMP_RS05095 - CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon, at 969,513 to 970,031 _RS05095 MMP_RS05100: MMP_RS05100 - CO dehydrogenase/acetyl-CoA synthase complex subunit alpha, at 970,041 to 972,383 _RS05100 Position (kb) 969 970 971Strain fitness (log2 ratio) -3 -2 -1 0 1at 968.710 kb on - strand, within MMP_RS05090at 968.901 kb on - strand, within MMP_RS05090at 968.950 kb on - strand, within MMP_RS05090at 968.951 kb on + strand, within MMP_RS05090at 968.986 kb on + strand, within MMP_RS05090at 969.055 kb on - strand, within MMP_RS05090at 969.055 kb on - strand, within MMP_RS05090at 969.056 kb on + strand, within MMP_RS05090at 969.130 kb on - strand, within MMP_RS05090at 969.215 kb on - strand, within MMP_RS05090at 969.220 kb on + strand, within MMP_RS05090at 969.247 kb on - strand, within MMP_RS05090at 969.487 kb on - strandat 969.606 kb on - strand, within MMP_RS05095at 969.607 kb on + strand, within MMP_RS05095at 969.674 kb on + strand, within MMP_RS05095at 969.674 kb on + strand, within MMP_RS05095at 969.674 kb on + strand, within MMP_RS05095at 969.694 kb on + strand, within MMP_RS05095at 969.812 kb on + strand, within MMP_RS05095at 970.159 kb on + strandat 970.171 kb on + strandat 970.182 kb on - strandat 970.212 kb on - strandat 970.212 kb on - strandat 970.212 kb on - strandat 970.213 kb on + strandat 970.213 kb on + strandat 970.216 kb on - strandat 970.543 kb on + strand, within MMP_RS05100at 970.543 kb on + strand, within MMP_RS05100at 970.549 kb on - strand, within MMP_RS05100at 970.549 kb on - strand, within MMP_RS05100at 970.628 kb on - strand, within MMP_RS05100at 970.628 kb on - strand, within MMP_RS05100at 970.726 kb on - strand, within MMP_RS05100at 970.727 kb on + strand, within MMP_RS05100at 970.727 kb on + strand, within MMP_RS05100at 970.727 kb on + strand, within MMP_RS05100at 970.761 kb on - strand, within MMP_RS05100at 970.772 kb on + strand, within MMP_RS05100at 970.802 kb on - strand, within MMP_RS05100at 970.854 kb on - strand, within MMP_RS05100at 970.854 kb on - strand, within MMP_RS05100at 970.992 kb on - strand, within MMP_RS05100at 970.993 kb on + strand, within MMP_RS05100

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Per-strain Table

Position Strand Gene LocusTag Fraction McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
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968,710 - MMP_RS05090 0.42 -1.5
968,901 - MMP_RS05090 0.56 -1.1
968,950 - MMP_RS05090 0.60 -0.7
968,951 + MMP_RS05090 0.60 -1.3
968,986 + MMP_RS05090 0.62 -2.5
969,055 - MMP_RS05090 0.67 -0.4
969,055 - MMP_RS05090 0.67 -1.3
969,056 + MMP_RS05090 0.68 +0.6
969,130 - MMP_RS05090 0.73 -0.7
969,215 - MMP_RS05090 0.79 -0.7
969,220 + MMP_RS05090 0.79 -0.9
969,247 - MMP_RS05090 0.81 -1.5
969,487 - -1.2
969,606 - MMP_RS05095 0.18 -0.9
969,607 + MMP_RS05095 0.18 -2.3
969,674 + MMP_RS05095 0.31 -0.1
969,674 + MMP_RS05095 0.31 -1.8
969,674 + MMP_RS05095 0.31 +0.2
969,694 + MMP_RS05095 0.35 -0.7
969,812 + MMP_RS05095 0.58 -2.1
970,159 + -1.6
970,171 + -0.1
970,182 - -0.7
970,212 - +0.1
970,212 - -1.3
970,212 - +1.1
970,213 + -1.9
970,213 + -1.2
970,216 - -1.5
970,543 + MMP_RS05100 0.21 -0.5
970,543 + MMP_RS05100 0.21 -0.8
970,549 - MMP_RS05100 0.22 +0.0
970,549 - MMP_RS05100 0.22 -0.5
970,628 - MMP_RS05100 0.25 +0.2
970,628 - MMP_RS05100 0.25 -2.9
970,726 - MMP_RS05100 0.29 -1.3
970,727 + MMP_RS05100 0.29 -0.7
970,727 + MMP_RS05100 0.29 -0.7
970,727 + MMP_RS05100 0.29 +1.0
970,761 - MMP_RS05100 0.31 -1.0
970,772 + MMP_RS05100 0.31 -2.1
970,802 - MMP_RS05100 0.32 -1.5
970,854 - MMP_RS05100 0.35 +0.5
970,854 - MMP_RS05100 0.35 -0.3
970,992 - MMP_RS05100 0.41 +0.4
970,993 + MMP_RS05100 0.41 -2.2

Or see this region's nucleotide sequence