Strain Fitness in Methanococcus maripaludis S2 around MMP_RS03980

Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
753,176	-				+0.4
753,177	+				+0.5
753,250	+		MMP_RS08885	0.21	+0.4
753,269	-		MMP_RS08885	0.25	+0.4
753,275	-		MMP_RS08885	0.26	+0.5
753,275	-		MMP_RS08885	0.26	+1.9
753,283	+		MMP_RS08885	0.28	+0.8
753,285	-		MMP_RS08885	0.28	+0.2
753,349	+		MMP_RS08885	0.40	+0.5
753,349	+		MMP_RS08885	0.40	+1.3
753,434	-		MMP_RS08885	0.56	+0.1
753,447	-		MMP_RS08885	0.59	+2.5
753,450	-		MMP_RS08885	0.59	-0.6
753,454	-		MMP_RS08885	0.60	-1.7
753,455	+		MMP_RS08885	0.60	+0.7
753,478	-		MMP_RS08885	0.65	+0.1
753,546	+		MMP_RS08885	0.78	+0.4
753,546	+		MMP_RS08885	0.78	+1.1
753,549	-		MMP_RS08885	0.78	+1.7
753,549	-		MMP_RS08885	0.78	-2.2
753,549	-		MMP_RS08885	0.78	-1.1
753,550	+		MMP_RS08885	0.78	-0.7
753,550	+		MMP_RS08885	0.78	-1.3
753,553	+		MMP_RS08885	0.79	+1.8
753,569	-		MMP_RS08885	0.82	-0.3
753,570	+		MMP_RS08885	0.82	-1.2
753,600	-		MMP_RS08885	0.88	-1.4
753,608	+		MMP_RS08885	0.90	+0.5
753,624	-				+0.1
753,658	-				+1.2
753,661	+				+0.2
753,682	+				-2.4
753,709	-				-0.4
753,740	+				-1.1
753,747	+				+0.0
753,785	-				-0.5
753,809	-		MMP_RS03975	0.11	-0.8
753,810	+		MMP_RS03975	0.12	+0.3
753,867	+		MMP_RS03975	0.30	+1.3
753,869	-		MMP_RS03975	0.31	+1.8
753,870	+		MMP_RS03975	0.31	+1.3
753,950	+		MMP_RS03975	0.57	+1.0
753,957	+		MMP_RS03975	0.59	-0.3
753,967	+		MMP_RS03975	0.62	+0.8
753,997	-		MMP_RS03975	0.72	+1.3
753,997	-		MMP_RS03975	0.72	+1.2
753,998	+		MMP_RS03975	0.72	-1.8
754,000	+		MMP_RS03975	0.73	-3.6
754,015	-		MMP_RS03975	0.78	+0.9
754,021	-		MMP_RS03975	0.80	-1.5
754,021	-		MMP_RS03975	0.80	-0.1
754,022	+		MMP_RS03975	0.80	-2.1
754,022	+		MMP_RS03975	0.80	-0.1
754,023	-		MMP_RS03975	0.81	-2.0
754,023	-		MMP_RS03975	0.81	+0.0
754,023	-		MMP_RS03975	0.81	-1.3
754,023	-		MMP_RS03975	0.81	+2.7
754,023	-		MMP_RS03975	0.81	+0.7
754,024	+		MMP_RS03975	0.81	+1.7
754,025	-		MMP_RS03975	0.81	+1.2
754,026	+		MMP_RS03975	0.82	-0.1
754,026	+		MMP_RS03975	0.82	+0.7
754,026	+		MMP_RS03975	0.82	-2.0
754,070	+				-0.5
754,073	+				-0.5
754,177	-		MMP_RS03980	0.23	-0.8
754,228	+		MMP_RS03980	0.42	+1.2
754,241	+		MMP_RS03980	0.47	+1.5
754,264	+		MMP_RS03980	0.55	+0.6
754,266	+		MMP_RS03980	0.56	+0.6
754,284	-		MMP_RS03980	0.62	+3.2
754,299	-		MMP_RS03980	0.68	+0.2
754,305	+		MMP_RS03980	0.70	+1.0
754,305	+		MMP_RS03980	0.70	+1.8
754,323	-		MMP_RS03980	0.77	-0.8
754,323	-		MMP_RS03980	0.77	-0.5
754,347	+		MMP_RS03980	0.85	+0.8
754,408	-				-2.6
754,502	-				-1.5
754,541	+				+1.7
754,594	-				+2.1
754,597	-				-2.5
754,601	-				-1.1
754,635	+		MMP_RS03985	0.13	+0.9
754,707	+		MMP_RS03985	0.20	-0.7
754,883	+		MMP_RS03985	0.38	-1.6
754,886	-		MMP_RS03985	0.38	+1.1
754,893	+		MMP_RS03985	0.39	-0.6
754,938	+		MMP_RS03985	0.43	+0.9
754,974	-		MMP_RS03985	0.47	+2.4
754,975	+		MMP_RS03985	0.47	-0.2
755,024	-		MMP_RS03985	0.52	+0.9
755,025	+		MMP_RS03985	0.52	+1.3
755,051	+		MMP_RS03985	0.54	-1.9
755,126	-		MMP_RS03985	0.62	-0.3
755,157	-		MMP_RS03985	0.65	+1.5
755,163	-		MMP_RS03985	0.65	+2.1
755,163	-		MMP_RS03985	0.65	+1.4
755,164	+		MMP_RS03985	0.66	+1.4
755,164	+		MMP_RS03985	0.66	+0.9
755,180	-		MMP_RS03985	0.67	-0.4
755,180	-		MMP_RS03985	0.67	-0.7
755,181	+		MMP_RS03985	0.67	+0.9
755,284	-		MMP_RS03985	0.78	+0.2
755,287	-		MMP_RS03985	0.78	-3.9
755,325	-		MMP_RS03985	0.82	-1.1
755,371	-		MMP_RS03985	0.86	+1.1