Strain Fitness in Methanococcus maripaludis S2 around MMP_RS03875

Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS03870 and MMP_RS03875 are separated by 686 nucleotides MMP_RS03870: MMP_RS03870 - purine NTPase, at 733,128 to 733,808 _RS03870 MMP_RS03875: MMP_RS03875 - hypothetical protein, at 734,495 to 734,872 _RS03875 Position (kb) 734 735Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 733.547 kb on - strand, within MMP_RS03870at 733.550 kb on + strand, within MMP_RS03870at 733.566 kb on - strand, within MMP_RS03870at 733.571 kb on - strand, within MMP_RS03870at 733.622 kb on + strand, within MMP_RS03870at 733.855 kb on + strandat 733.941 kb on + strandat 733.964 kb on - strandat 733.976 kb on - strandat 733.986 kb on - strandat 733.986 kb on - strandat 733.987 kb on + strandat 733.997 kb on + strandat 734.102 kb on + strandat 734.108 kb on - strandat 734.170 kb on - strandat 734.171 kb on + strandat 734.174 kb on + strandat 734.174 kb on + strandat 734.218 kb on - strandat 734.239 kb on - strandat 734.277 kb on + strandat 734.281 kb on - strandat 734.281 kb on - strandat 734.286 kb on + strandat 734.292 kb on - strandat 734.392 kb on - strandat 734.393 kb on + strandat 734.409 kb on + strandat 734.413 kb on + strandat 734.497 kb on + strandat 734.498 kb on - strandat 734.818 kb on + strand, within MMP_RS03875at 734.818 kb on + strand, within MMP_RS03875at 734.818 kb on + strand, within MMP_RS03875at 734.818 kb on + strand, within MMP_RS03875at 734.818 kb on + strand, within MMP_RS03875at 734.992 kb on + strandat 735.090 kb on + strandat 735.438 kb on + strandat 735.438 kb on + strandat 735.441 kb on + strandat 735.458 kb on + strandat 735.458 kb on + strandat 735.496 kb on + strandat 735.531 kb on + strandat 735.531 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
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733,547 - MMP_RS03870 0.62 +3.3
733,550 + MMP_RS03870 0.62 +2.1
733,566 - MMP_RS03870 0.64 +0.5
733,571 - MMP_RS03870 0.65 -1.1
733,622 + MMP_RS03870 0.73 -1.4
733,855 + -0.5
733,941 + -0.1
733,964 - -0.4
733,976 - +1.1
733,986 - +0.3
733,986 - +0.5
733,987 + -0.9
733,997 + -0.1
734,102 + -0.1
734,108 - +0.2
734,170 - -0.6
734,171 + +0.4
734,174 + -1.1
734,174 + -0.0
734,218 - -0.9
734,239 - -3.4
734,277 + -2.7
734,281 - +0.6
734,281 - +0.5
734,286 + +2.6
734,292 - -0.3
734,392 - +2.0
734,393 + +0.6
734,409 + -0.3
734,413 + -0.8
734,497 + +0.7
734,498 - -0.1
734,818 + MMP_RS03875 0.85 +0.5
734,818 + MMP_RS03875 0.85 +1.4
734,818 + MMP_RS03875 0.85 +0.8
734,818 + MMP_RS03875 0.85 +2.5
734,818 + MMP_RS03875 0.85 -0.3
734,992 + -3.7
735,090 + -0.5
735,438 + -2.6
735,438 + -2.9
735,441 + +0.3
735,458 + -1.8
735,458 + +1.1
735,496 + -2.6
735,531 + +1.4
735,531 + +1.3

Or see this region's nucleotide sequence