Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS03470 and MMP_RS03475 overlap by 4 nucleotides MMP_RS03475 and MMP_RS03480 are separated by 49 nucleotides
MMP_RS03470: MMP_RS03470 - phosphoadenosine phosphosulfate reductase family protein, at 651,185 to 652,060
_RS03470
MMP_RS03475: MMP_RS03475 - hypothetical protein, at 652,057 to 652,287
_RS03475
MMP_RS03480: MMP_RS03480 - SulP family inorganic anion transporter, at 652,337 to 653,956
_RS03480
Position (kb) 652
653 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 651.102 kb on - strand at 651.139 kb on + strand at 651.147 kb on + strand at 651.163 kb on - strand at 651.170 kb on - strand at 651.511 kb on - strand, within MMP_RS03470 at 651.559 kb on + strand, within MMP_RS03470 at 651.751 kb on - strand, within MMP_RS03470 at 651.752 kb on + strand, within MMP_RS03470 at 651.752 kb on + strand, within MMP_RS03470 at 651.752 kb on + strand, within MMP_RS03470 at 651.752 kb on + strand, within MMP_RS03470 at 651.780 kb on - strand, within MMP_RS03470 at 651.793 kb on - strand, within MMP_RS03470 at 651.793 kb on - strand, within MMP_RS03470 at 651.797 kb on - strand, within MMP_RS03470 at 651.804 kb on - strand, within MMP_RS03470 at 651.941 kb on + strand, within MMP_RS03470 at 652.137 kb on + strand, within MMP_RS03475 at 652.266 kb on - strand at 652.271 kb on - strand at 652.387 kb on + strand at 652.531 kb on - strand, within MMP_RS03480 at 652.531 kb on - strand, within MMP_RS03480 at 652.532 kb on + strand, within MMP_RS03480 at 652.578 kb on - strand, within MMP_RS03480 at 652.588 kb on - strand, within MMP_RS03480 at 652.922 kb on + strand, within MMP_RS03480 at 652.963 kb on + strand, within MMP_RS03480 at 653.107 kb on - strand, within MMP_RS03480 at 653.219 kb on + strand, within MMP_RS03480 at 653.219 kb on + strand, within MMP_RS03480
Per-strain Table
Position Strand Gene LocusTag Fraction McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM remove 651,102 - -0.6 651,139 + +1.3 651,147 + -1.0 651,163 - -1.4 651,170 - +0.3 651,511 - MMP_RS03470 0.37 +0.7 651,559 + MMP_RS03470 0.43 +1.0 651,751 - MMP_RS03470 0.65 -0.9 651,752 + MMP_RS03470 0.65 -2.6 651,752 + MMP_RS03470 0.65 -0.9 651,752 + MMP_RS03470 0.65 -1.0 651,752 + MMP_RS03470 0.65 -3.2 651,780 - MMP_RS03470 0.68 -0.1 651,793 - MMP_RS03470 0.69 -0.9 651,793 - MMP_RS03470 0.69 -1.1 651,797 - MMP_RS03470 0.70 -1.3 651,804 - MMP_RS03470 0.71 -0.7 651,941 + MMP_RS03470 0.86 -0.3 652,137 + MMP_RS03475 0.35 -0.8 652,266 - -2.4 652,271 - +1.3 652,387 + -1.0 652,531 - MMP_RS03480 0.12 +1.0 652,531 - MMP_RS03480 0.12 -0.6 652,532 + MMP_RS03480 0.12 -0.1 652,578 - MMP_RS03480 0.15 +2.0 652,588 - MMP_RS03480 0.15 +1.1 652,922 + MMP_RS03480 0.36 -1.2 652,963 + MMP_RS03480 0.39 +0.4 653,107 - MMP_RS03480 0.48 +0.1 653,219 + MMP_RS03480 0.54 +0.1 653,219 + MMP_RS03480 0.54 -0.0
Or see this region's nucleotide sequence