Strain Fitness in Methanococcus maripaludis S2 around MMP_RS02900
Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM |
---|---|---|---|---|---|
remove | |||||
552,050 | + | MMP_RS02895 | 0.43 | +1.7 | |
552,092 | - | MMP_RS02895 | 0.46 | -0.3 | |
552,113 | + | MMP_RS02895 | 0.48 | +1.5 | |
552,131 | + | MMP_RS02895 | 0.49 | +1.8 | |
552,187 | + | MMP_RS02895 | 0.54 | +1.4 | |
552,189 | + | MMP_RS02895 | 0.54 | -1.4 | |
552,300 | - | MMP_RS02895 | 0.62 | +1.4 | |
552,336 | + | MMP_RS02895 | 0.65 | +1.8 | |
552,422 | - | MMP_RS02895 | 0.72 | +2.5 | |
552,425 | + | MMP_RS02895 | 0.72 | -0.5 | |
552,433 | - | MMP_RS02895 | 0.73 | +0.9 | |
552,530 | - | MMP_RS02895 | 0.80 | +1.9 | |
552,828 | + | -1.8 | |||
552,829 | - | -2.1 | |||
552,829 | - | -3.5 | |||
552,830 | + | +0.9 | |||
552,832 | - | -1.9 | |||
552,833 | + | -0.0 | |||
552,833 | + | -1.1 | |||
552,834 | - | -3.0 | |||
552,918 | + | -1.0 | |||
553,313 | - | MMP_RS02900 | 0.79 | -2.5 | |
553,530 | - | MMP_RS02905 | 0.16 | -0.5 | |
553,717 | + | MMP_RS02905 | 0.50 | +1.4 | |
553,737 | + | MMP_RS02905 | 0.53 | -2.3 | |
553,746 | + | MMP_RS02905 | 0.55 | +0.3 | |
554,018 | - | -1.3 | |||
554,055 | - | +0.6 | |||
554,066 | - | +0.1 | |||
554,118 | - | -2.6 | |||
554,171 | - | +0.2 | |||
554,252 | - | MMP_RS02910 | 0.11 | +0.7 | |
554,294 | + | MMP_RS02910 | 0.16 | -0.2 |
Or see this region's nucleotide sequence