Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00625

Experiment: McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
113,770	-				-1.7
113,806	-				-0.7
113,886	-		MMP_RS00620	0.22	+0.0
113,911	+		MMP_RS00620	0.27	-0.6
113,953	+		MMP_RS00620	0.33	-0.4
113,986	+		MMP_RS00620	0.39	-4.7
114,042	-		MMP_RS00620	0.48	-1.9
114,043	+		MMP_RS00620	0.48	-1.0
114,055	+		MMP_RS00620	0.50	-1.2
114,122	+		MMP_RS00620	0.61	+0.3
114,122	+		MMP_RS00620	0.61	-0.1
114,142	-		MMP_RS00620	0.64	+1.3
114,229	-		MMP_RS00620	0.78	+0.2
114,261	-		MMP_RS00620	0.83	+0.5
114,304	+				-0.8
114,346	+				-1.9
114,402	-				+1.5
114,403	+				-1.5
114,405	+				-2.7
114,406	-				+0.5
114,407	+				-0.5
114,409	-				-3.3
114,486	+				+1.7
114,493	+				+1.2
114,503	-				-0.5
114,520	-		MMP_RS00625	0.12	-0.4
114,525	+		MMP_RS00625	0.13	+0.6
114,533	-		MMP_RS00625	0.14	-2.6
114,534	+		MMP_RS00625	0.14	+0.4
114,535	-		MMP_RS00625	0.14	-1.2
114,536	+		MMP_RS00625	0.15	-1.4
114,808	-		MMP_RS00625	0.63	-1.0
114,880	+		MMP_RS00625	0.76	-0.3
114,963	+				-1.4
114,963	+				-0.9
114,964	-				-1.6
114,965	+				-0.0
114,965	+				+0.5
115,069	+				+1.2
115,073	+				-2.2
115,073	+				+0.1
115,135	-				-0.1
115,135	-				-2.4
115,136	+				+0.6
115,326	-		MMP_RS00630	0.37	+0.1
115,344	+		MMP_RS00630	0.40	+0.1
115,615	-		MMP_RS00630	0.89	+0.6
115,616	+		MMP_RS00630	0.89	+0.1
115,616	+		MMP_RS00630	0.89	-1.3
115,618	-		MMP_RS00630	0.89	-1.4
115,618	-		MMP_RS00630	0.89	+1.4
115,619	+		MMP_RS00630	0.89	-0.4
115,676	+				+0.4
115,851	+		MMP_RS00635	0.31	+0.8
115,890	-		MMP_RS00635	0.39	-3.2
115,901	+		MMP_RS00635	0.41	-0.5
115,916	+		MMP_RS00635	0.44	-0.2