Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06920

Experiment: McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM
1,320,296	-		MMP_RS06915	0.30	-0.7
1,320,296	-		MMP_RS06915	0.30	-0.1
1,320,342	-		MMP_RS06915	0.35	+0.2
1,320,342	-		MMP_RS06915	0.35	-1.1
1,320,646	+		MMP_RS06915	0.62	-0.9
1,320,678	+		MMP_RS06915	0.65	-0.9
1,320,808	-		MMP_RS06915	0.76	-0.1
1,321,005	+				+0.0
1,321,053	-				+0.0
1,321,068	-				+1.1
1,321,328	+				-0.0
1,321,374	+				-0.5
1,321,591	+		MMP_RS06920	0.17	+0.1
1,321,837	+		MMP_RS06920	0.25	-1.5
1,321,895	-		MMP_RS06920	0.27	-2.2
1,321,920	+		MMP_RS06920	0.28	-1.1
1,321,952	-		MMP_RS06920	0.29	-1.3
1,321,953	+		MMP_RS06920	0.29	-0.3
1,322,012	+		MMP_RS06920	0.31	-0.2
1,322,026	+		MMP_RS06920	0.31	-1.5
1,322,055	+		MMP_RS06920	0.32	+0.1
1,322,165	-		MMP_RS06920	0.36	+0.1
1,322,209	-		MMP_RS06920	0.38	-0.1
1,322,471	-		MMP_RS06920	0.46	+0.5
1,322,488	+		MMP_RS06920	0.47	-0.4
1,322,785	-		MMP_RS06920	0.57	-1.6
1,323,117	+		MMP_RS06920	0.68	-0.9
1,323,178	-		MMP_RS06920	0.70	+0.3
1,323,231	-		MMP_RS06920	0.72	+0.4
1,323,416	+		MMP_RS06920	0.78	-1.4
1,323,536	-		MMP_RS06920	0.82	+0.8
1,323,703	+		MMP_RS06920	0.88	-1.0
1,323,836	-				+3.5
1,324,023	+				-0.5
1,324,056	+				+1.3
1,324,087	-				-3.0
1,324,154	-		MMP_RS06925	0.19	+0.9
1,324,161	+		MMP_RS06925	0.21	-2.1
1,324,181	+		MMP_RS06925	0.26	-1.6
1,324,184	-		MMP_RS06925	0.27	+1.5
1,324,364	+		MMP_RS06925	0.72	-1.6
1,324,461	-				-0.5
1,324,466	+				+0.3
1,324,497	-				+1.2
1,324,521	-				-1.1
1,324,587	-		MMP_RS06930	0.12	-2.1
1,324,588	+		MMP_RS06930	0.12	-0.4
1,324,590	+		MMP_RS06930	0.13	-1.0
1,324,590	+		MMP_RS06930	0.13	-1.9
1,324,634	-		MMP_RS06930	0.18	-0.2
1,324,675	-		MMP_RS06930	0.23	-1.3
1,324,684	-		MMP_RS06930	0.24	-1.9
1,324,685	+		MMP_RS06930	0.24	+0.4
1,324,777	-		MMP_RS06930	0.36	+0.5
1,324,924	-		MMP_RS06930	0.54	+0.4
1,324,925	+		MMP_RS06930	0.54	+0.1