Strain Fitness in Methanococcus maripaludis S2 around MMP_RS04700

Experiment: McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM
898,679	-		MMP_RS04695	0.38	+0.2
898,998	-		MMP_RS04695	0.70	+1.6
898,999	+		MMP_RS04695	0.70	+1.3
898,999	+		MMP_RS04695	0.70	+1.8
899,028	-		MMP_RS04695	0.73	+1.8
899,029	+		MMP_RS04695	0.73	+2.9
899,066	+		MMP_RS04695	0.76	+0.4
899,067	-		MMP_RS04695	0.76	-0.2
899,068	+		MMP_RS04695	0.77	+2.1
899,068	+		MMP_RS04695	0.77	-0.3
899,085	+		MMP_RS04695	0.78	+1.6
899,236	+				+2.7
899,245	+				+1.9
899,276	-				+2.3
899,355	-				+1.7
899,355	-				-1.3
899,366	-				+2.5
899,366	-				+1.2
899,366	-				+0.5
899,366	-				+0.9
899,367	+				-0.1
899,367	+				-0.6
899,368	-				+1.7
899,368	-				-0.6
899,368	-				-0.9
899,369	+				+1.2
899,375	-				+0.5
899,376	+				+1.0
899,376	+				+0.9
899,376	+				+0.1
899,385	-				+2.1
899,385	-				+1.3
899,385	-				+0.8
899,386	+				+3.3
899,386	+				+0.9
899,418	+				+1.3
899,418	+				+3.5
899,420	-				+0.3
899,558	-		MMP_RS04700	0.30	+1.8
899,559	+		MMP_RS04700	0.30	-0.2
899,564	-		MMP_RS04700	0.31	+1.1
899,565	+		MMP_RS04700	0.31	+1.6
899,571	-		MMP_RS04700	0.32	+0.8
899,576	-		MMP_RS04700	0.33	+0.0
899,581	-		MMP_RS04700	0.34	-1.3
899,582	+		MMP_RS04700	0.34	-0.5
899,693	+		MMP_RS04700	0.53	-1.1
899,778	-		MMP_RS04700	0.68	+1.7
899,779	+		MMP_RS04700	0.68	-0.0
899,799	+		MMP_RS04700	0.72	+1.1
899,799	+		MMP_RS04700	0.72	-0.4
899,804	-		MMP_RS04700	0.73	+1.9
899,805	+		MMP_RS04700	0.73	+2.8
899,820	+		MMP_RS04700	0.75	-1.2
899,824	-		MMP_RS04700	0.76	+1.8
899,825	+		MMP_RS04700	0.76	+1.3
899,865	+		MMP_RS04700	0.83	-1.6
899,865	+		MMP_RS04700	0.83	+1.1
899,912	-				+2.3
899,913	+				+0.0
899,917	-				-0.7
899,917	-				+1.0
899,918	+				+0.5
899,918	+				+1.2
900,074	+				-1.7
900,265	-				+0.6
900,298	-				-3.3
900,299	+				-1.4
900,299	+				-2.1
900,299	+				+1.1
900,299	+				+0.4
900,299	+				-0.4
900,299	+				-2.3
900,323	+				-2.8
900,464	-				-1.1
900,465	+				-0.7
900,501	-				-0.2
900,913	-				-1.8
900,914	+				-0.8
900,914	+				-1.7
900,914	+				-1.1
900,916	+				-1.1
900,939	-				+2.9
900,940	+				-3.3