Strain Fitness in Methanococcus maripaludis S2 around MMP_RS04415

Experiment: McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM
838,903	+				+1.9
838,927	+		MMP_RS04405	0.11	-0.8
838,943	+		MMP_RS04405	0.17	-1.7
838,990	-		MMP_RS04405	0.35	-0.3
838,993	-		MMP_RS04405	0.36	+0.3
839,004	+		MMP_RS04405	0.40	+0.3
839,016	-		MMP_RS04405	0.44	-0.5
839,026	-		MMP_RS04405	0.48	+0.6
839,049	-		MMP_RS04405	0.57	+0.5
839,050	+		MMP_RS04405	0.57	-0.7
839,065	-		MMP_RS04405	0.63	-0.7
839,076	+		MMP_RS04405	0.67	+0.1
839,138	-		MMP_RS04405	0.90	+1.9
839,169	+				+1.2
839,174	+				-2.8
839,263	+				+2.8
839,599	-		MMP_RS04410	0.64	-0.4
839,620	-		MMP_RS04410	0.67	+0.0
839,643	+		MMP_RS04410	0.71	+1.2
839,663	-		MMP_RS04410	0.74	+0.1
839,748	-		MMP_RS04410	0.89	+0.1
839,819	+				+1.0
839,843	+				+1.6
839,849	-				-1.7
839,850	+				+0.4
839,863	-				+0.1
839,870	+				+0.9
839,876	+				-0.8
839,919	+				+1.7
839,936	+				+2.0
839,936	+				-0.9
840,045	-		MMP_RS04415	0.31	-0.7
840,045	-		MMP_RS04415	0.31	+1.3
840,046	+		MMP_RS04415	0.31	-1.8
840,086	+		MMP_RS04415	0.40	+0.9
840,122	-		MMP_RS04415	0.47	-0.1
840,122	-		MMP_RS04415	0.47	+0.7
840,123	+		MMP_RS04415	0.47	-0.9
840,148	+		MMP_RS04415	0.53	+1.9
840,153	-		MMP_RS04415	0.54	-0.9
840,156	-		MMP_RS04415	0.54	+1.4
840,157	+		MMP_RS04415	0.55	+3.3
840,172	+		MMP_RS04415	0.58	+1.1
840,193	+		MMP_RS04415	0.62	+0.8
840,197	-		MMP_RS04415	0.63	+0.3
840,360	+				+0.3
840,362	-				-1.6
840,392	-				+0.0
840,393	+				-0.0
840,422	+				-0.0
840,458	-				+0.6
840,463	+				+0.3
840,463	+				-0.1
840,485	-				+0.6
840,486	+				+1.4
840,487	-				+1.5
840,489	-				-0.9
840,490	+				+1.4
840,490	+				+0.7
840,501	-				+0.6
840,502	+				-0.9
840,502	+				+1.1
840,510	+				+1.4
840,520	-				-0.7
840,582	+				+1.3
840,590	-				-0.3
840,590	-				+0.3
840,590	-				+1.1
840,590	-				-0.6
840,591	+				+0.5
840,595	+				-1.0
840,599	+				-0.7
840,637	-				+1.7
840,650	-				-2.7
840,676	-				+0.8
840,676	-				+0.5
840,677	+				+0.0
840,677	+				+1.4
840,699	-		MMP_RS04420	0.12	-0.8
840,791	+		MMP_RS04420	0.26	-1.2
840,937	-		MMP_RS04420	0.50	+0.5
841,071	-		MMP_RS04420	0.71	-0.3
841,155	-		MMP_RS04420	0.85	+0.3
841,182	+		MMP_RS04420	0.89	+0.9
841,300	+				-0.6
841,311	-				-0.0
841,311	-				+1.5
841,311	-				+0.4
841,337	+				+0.4
841,338	-				+0.2
841,338	-				+0.6
841,339	+				+0.1
841,339	+				-1.8
841,343	-				+1.3
841,344	+				+2.0
841,353	-				-2.7