Experiment: McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS03695 and MMP_RS03700 are separated by 12 nucleotides MMP_RS03700 and MMP_RS03705 are separated by 204 nucleotides
MMP_RS03695: MMP_RS03695 - UDP-N-acetyl-D-mannosamine dehydrogenase, at 696,475 to 697,758
_RS03695
MMP_RS03700: MMP_RS03700 - sodium:proton antiporter, at 697,771 to 699,024
_RS03700
MMP_RS03705: MMP_RS03705 - (5-formylfuran-3-yl)methyl phosphate synthase, at 699,229 to 699,939
_RS03705
Position (kb) 697
698
699
700 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 696.787 kb on + strand at 696.857 kb on + strand at 696.884 kb on - strand at 696.973 kb on - strand at 696.974 kb on + strand at 697.175 kb on + strand at 697.317 kb on + strand at 697.372 kb on + strand at 697.382 kb on + strand at 697.402 kb on - strand at 697.556 kb on + strand at 697.614 kb on - strand at 697.889 kb on - strand at 697.932 kb on - strand, within MMP_RS03700 at 697.940 kb on - strand, within MMP_RS03700 at 697.941 kb on + strand, within MMP_RS03700 at 698.235 kb on - strand, within MMP_RS03700 at 698.256 kb on + strand, within MMP_RS03700 at 698.256 kb on + strand, within MMP_RS03700 at 698.257 kb on - strand, within MMP_RS03700 at 698.363 kb on + strand, within MMP_RS03700 at 698.363 kb on + strand, within MMP_RS03700 at 698.551 kb on - strand, within MMP_RS03700 at 698.616 kb on - strand, within MMP_RS03700 at 698.617 kb on + strand, within MMP_RS03700 at 698.617 kb on + strand, within MMP_RS03700 at 698.617 kb on + strand, within MMP_RS03700 at 698.654 kb on - strand, within MMP_RS03700 at 698.658 kb on - strand, within MMP_RS03700 at 698.676 kb on - strand, within MMP_RS03700 at 698.676 kb on - strand, within MMP_RS03700 at 698.677 kb on + strand, within MMP_RS03700 at 698.690 kb on - strand, within MMP_RS03700 at 698.690 kb on - strand, within MMP_RS03700 at 698.691 kb on + strand, within MMP_RS03700 at 698.691 kb on + strand, within MMP_RS03700 at 698.691 kb on + strand, within MMP_RS03700 at 698.691 kb on + strand, within MMP_RS03700 at 698.692 kb on - strand, within MMP_RS03700 at 698.693 kb on + strand, within MMP_RS03700 at 698.693 kb on + strand, within MMP_RS03700 at 698.694 kb on - strand, within MMP_RS03700 at 698.768 kb on + strand, within MMP_RS03700 at 698.903 kb on + strand at 698.913 kb on - strand at 698.945 kb on + strand at 698.945 kb on + strand at 698.965 kb on - strand at 698.999 kb on - strand at 699.038 kb on + strand at 699.041 kb on - strand at 699.047 kb on + strand at 699.048 kb on - strand at 699.048 kb on - strand at 699.049 kb on + strand at 699.075 kb on - strand at 699.106 kb on - strand at 699.106 kb on - strand at 699.113 kb on - strand at 699.134 kb on + strand at 699.171 kb on - strand at 699.176 kb on + strand at 699.176 kb on + strand at 699.182 kb on + strand at 699.186 kb on + strand at 699.186 kb on + strand at 699.197 kb on - strand at 699.298 kb on + strand at 699.350 kb on - strand at 699.462 kb on + strand at 699.462 kb on + strand at 699.795 kb on - strand at 699.819 kb on + strand at 699.827 kb on - strand at 699.827 kb on - strand at 699.827 kb on - strand at 699.864 kb on - strand at 699.955 kb on + strand at 699.968 kb on + strand at 699.977 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM remove 696,787 + -0.9 696,857 + -3.2 696,884 - +1.8 696,973 - -2.5 696,974 + +4.2 697,175 + -3.1 697,317 + -0.9 697,372 + -1.5 697,382 + -0.4 697,402 - -3.3 697,556 + +1.5 697,614 - -3.7 697,889 - +0.2 697,932 - MMP_RS03700 0.13 +1.5 697,940 - MMP_RS03700 0.13 -1.1 697,941 + MMP_RS03700 0.14 -2.5 698,235 - MMP_RS03700 0.37 -0.5 698,256 + MMP_RS03700 0.39 -3.6 698,256 + MMP_RS03700 0.39 +0.5 698,257 - MMP_RS03700 0.39 -0.7 698,363 + MMP_RS03700 0.47 -1.9 698,363 + MMP_RS03700 0.47 +0.9 698,551 - MMP_RS03700 0.62 +1.2 698,616 - MMP_RS03700 0.67 -0.3 698,617 + MMP_RS03700 0.67 -1.1 698,617 + MMP_RS03700 0.67 -1.2 698,617 + MMP_RS03700 0.67 -0.6 698,654 - MMP_RS03700 0.70 -1.2 698,658 - MMP_RS03700 0.71 -3.6 698,676 - MMP_RS03700 0.72 +0.2 698,676 - MMP_RS03700 0.72 -1.0 698,677 + MMP_RS03700 0.72 +1.2 698,690 - MMP_RS03700 0.73 -1.3 698,690 - MMP_RS03700 0.73 +1.1 698,691 + MMP_RS03700 0.73 -1.1 698,691 + MMP_RS03700 0.73 +0.2 698,691 + MMP_RS03700 0.73 -0.7 698,691 + MMP_RS03700 0.73 -2.3 698,692 - MMP_RS03700 0.73 -3.0 698,693 + MMP_RS03700 0.74 -1.0 698,693 + MMP_RS03700 0.74 -1.9 698,694 - MMP_RS03700 0.74 +0.2 698,768 + MMP_RS03700 0.80 -1.2 698,903 + -0.4 698,913 - -2.6 698,945 + +0.1 698,945 + -3.6 698,965 - +2.0 698,999 - -0.7 699,038 + +3.2 699,041 - -2.3 699,047 + -0.6 699,048 - +0.0 699,048 - -0.9 699,049 + +0.0 699,075 - +0.3 699,106 - +0.5 699,106 - -1.0 699,113 - +0.3 699,134 + +1.4 699,171 - -0.7 699,176 + -2.7 699,176 + -1.3 699,182 + -1.1 699,186 + -3.3 699,186 + -2.1 699,197 - -3.1 699,298 + -1.1 699,350 - -1.1 699,462 + -1.7 699,462 + -2.3 699,795 - -1.9 699,819 + -1.3 699,827 - -3.2 699,827 - -1.7 699,827 - -3.5 699,864 - -1.2 699,955 + -1.7 699,968 + +0.9 699,977 + +1.8
Or see this region's nucleotide sequence