Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00555

Experiment: McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM
107,145	-				+0.1
107,148	+				+1.4
107,155	+				+0.1
107,167	+				-1.2
107,178	+				-0.0
107,181	-				-1.4
107,181	-				+1.2
107,181	-				+1.7
107,182	+				+0.7
107,186	-				+1.1
107,218	-				-1.6
107,219	+				-0.3
107,292	-		MMP_RS00545	0.15	+0.6
107,292	-		MMP_RS00545	0.15	+0.5
107,529	+		MMP_RS00545	0.59	+0.1
107,559	+		MMP_RS00545	0.64	-0.3
107,597	+		MMP_RS00545	0.71	+1.7
107,974	-				+0.3
107,975	+				-0.5
107,979	+				-2.6
107,998	-				+1.8
108,033	+				+0.3
108,052	-				+0.1
108,062	-				-0.9
108,063	+				+1.0
108,076	-				-1.3
108,076	-				-0.7
108,080	-				-0.4
108,081	+				-1.2
108,083	+				+0.0
108,157	-				-0.6
108,157	-				-1.5
108,157	-				-0.8
108,158	+				-0.5
108,477	-		MMP_RS00555	0.30	-1.2
108,477	-		MMP_RS00555	0.30	-1.3
108,477	-		MMP_RS00555	0.30	-1.6
108,477	-		MMP_RS00555	0.30	+0.1
108,478	+		MMP_RS00555	0.31	-0.9
108,602	-		MMP_RS00555	0.41	-2.4
108,632	+		MMP_RS00555	0.44	-0.4
108,635	-		MMP_RS00555	0.44	-0.3
108,638	+		MMP_RS00555	0.44	+0.3
108,658	+		MMP_RS00555	0.46	-0.2
109,031	-		MMP_RS00555	0.79	-0.2
109,213	+				+0.2
109,214	-				+0.6
109,363	+				-0.8
109,363	+				+0.6
109,370	+				+0.7
109,552	-		MMP_RS00560	0.22	+2.9
109,552	-		MMP_RS00560	0.22	+0.8
109,639	-		MMP_RS00560	0.29	+0.3
109,639	-		MMP_RS00560	0.29	+0.6
109,663	+		MMP_RS00560	0.31	-1.1
109,665	-		MMP_RS00560	0.31	-0.0
109,673	+		MMP_RS00560	0.32	-1.8
109,857	-		MMP_RS00560	0.47	+2.5
109,863	-		MMP_RS00560	0.48	-0.2
109,863	-		MMP_RS00560	0.48	+0.7
109,864	+		MMP_RS00560	0.48	-0.0
109,868	+		MMP_RS00560	0.48	-0.3
109,894	+		MMP_RS00560	0.51	+1.0
110,130	+		MMP_RS00560	0.71	+0.2