Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11590

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
2,573,295	+		LRK54_RS11585	0.50	-1.0
2,573,295	+		LRK54_RS11585	0.50	+0.3
2,573,295	+		LRK54_RS11585	0.50	+0.3
2,573,295	+		LRK54_RS11585	0.50	-1.9
2,573,295	+		LRK54_RS11585	0.50	+0.1
2,573,295	+		LRK54_RS11585	0.50	+0.3
2,573,295	+		LRK54_RS11585	0.50	+1.2
2,573,295	+		LRK54_RS11585	0.50	-0.2
2,573,295	+		LRK54_RS11585	0.50	-0.1
2,573,295	+		LRK54_RS11585	0.50	+2.4
2,573,295	+		LRK54_RS11585	0.50	-1.6
2,573,296	-		LRK54_RS11585	0.50	-0.4
2,573,296	-		LRK54_RS11585	0.50	-0.5
2,573,296	-		LRK54_RS11585	0.50	-0.9
2,573,296	-		LRK54_RS11585	0.50	-0.6
2,573,296	-		LRK54_RS11585	0.50	-0.1
2,573,296	-		LRK54_RS11585	0.50	+0.8
2,573,296	-		LRK54_RS11585	0.50	+0.4
2,573,296	-		LRK54_RS11585	0.50	-0.5
2,573,296	-		LRK54_RS11585	0.50	+0.4
2,573,296	-		LRK54_RS11585	0.50	+2.1
2,573,296	-		LRK54_RS11585	0.50	-2.4
2,573,403	+		LRK54_RS11585	0.65	-1.0
2,573,403	+		LRK54_RS11585	0.65	+0.8
2,573,403	+		LRK54_RS11585	0.65	+0.1
2,573,403	+		LRK54_RS11585	0.65	+0.2
2,573,403	+		LRK54_RS11585	0.65	-0.9
2,573,403	+		LRK54_RS11585	0.65	-1.4
2,573,403	+		LRK54_RS11585	0.65	+0.2
2,573,403	+		LRK54_RS11585	0.65	-0.6
2,573,403	+		LRK54_RS11585	0.65	-0.3
2,573,403	+		LRK54_RS11585	0.65	+0.7
2,573,403	+		LRK54_RS11585	0.65	+1.1
2,573,403	+		LRK54_RS11585	0.65	-0.1
2,573,403	+		LRK54_RS11585	0.65	-1.2
2,573,403	+		LRK54_RS11585	0.65	+0.8
2,573,403	+		LRK54_RS11585	0.65	-0.4
2,573,403	+		LRK54_RS11585	0.65	-0.7
2,573,403	+		LRK54_RS11585	0.65	+0.4
2,573,403	+		LRK54_RS11585	0.65	+0.6
2,573,403	+		LRK54_RS11585	0.65	+2.1
2,573,403	+		LRK54_RS11585	0.65	+0.3
2,573,403	+		LRK54_RS11585	0.65	+1.3
2,573,403	+		LRK54_RS11585	0.65	-2.6
2,573,403	+		LRK54_RS11585	0.65	-0.2
2,573,403	+		LRK54_RS11585	0.65	+0.6
2,573,403	+		LRK54_RS11585	0.65	+0.8
2,573,404	-		LRK54_RS11585	0.65	-1.0
2,573,404	-		LRK54_RS11585	0.65	+0.7
2,573,404	-		LRK54_RS11585	0.65	+1.5
2,573,404	-		LRK54_RS11585	0.65	-0.4
2,573,404	-		LRK54_RS11585	0.65	+1.0
2,573,404	-		LRK54_RS11585	0.65	-1.2
2,573,404	-		LRK54_RS11585	0.65	+0.1
2,573,404	-		LRK54_RS11585	0.65	+0.8
2,573,404	-		LRK54_RS11585	0.65	-1.0
2,573,404	-		LRK54_RS11585	0.65	-0.6
2,573,404	-		LRK54_RS11585	0.65	+0.8
2,573,404	-		LRK54_RS11585	0.65	-0.8
2,573,404	-		LRK54_RS11585	0.65	-0.3
2,573,404	-		LRK54_RS11585	0.65	-1.0
2,573,404	-		LRK54_RS11585	0.65	+0.8
2,573,404	-		LRK54_RS11585	0.65	+0.2
2,573,404	-		LRK54_RS11585	0.65	-0.0
2,573,404	-		LRK54_RS11585	0.65	-0.5
2,573,404	-		LRK54_RS11585	0.65	+0.1
2,573,404	-		LRK54_RS11585	0.65	+0.7
2,573,404	-		LRK54_RS11585	0.65	-0.7
2,573,404	-		LRK54_RS11585	0.65	-0.5
2,573,404	-		LRK54_RS11585	0.65	-0.1
2,573,404	-		LRK54_RS11585	0.65	-2.0
2,573,469	+		LRK54_RS11585	0.75	-0.2
2,573,469	+		LRK54_RS11585	0.75	-0.3
2,573,469	+		LRK54_RS11585	0.75	-2.4
2,573,469	+		LRK54_RS11585	0.75	-0.1
2,573,469	+		LRK54_RS11585	0.75	+0.2
2,573,469	+		LRK54_RS11585	0.75	-0.1
2,573,469	+		LRK54_RS11585	0.75	+0.0
2,573,469	+		LRK54_RS11585	0.75	+0.8
2,573,469	+		LRK54_RS11585	0.75	+0.5
2,573,469	+		LRK54_RS11585	0.75	+0.3
2,573,469	+		LRK54_RS11585	0.75	-1.2
2,573,469	+		LRK54_RS11585	0.75	+0.3
2,573,469	+		LRK54_RS11585	0.75	-0.7
2,573,469	+		LRK54_RS11585	0.75	-0.4
2,573,469	+		LRK54_RS11585	0.75	+0.1
2,573,470	-		LRK54_RS11585	0.75	+1.2
2,573,470	-		LRK54_RS11585	0.75	+0.3
2,573,470	-		LRK54_RS11585	0.75	+0.2
2,573,470	-		LRK54_RS11585	0.75	+0.2
2,573,470	-		LRK54_RS11585	0.75	+0.4
2,573,470	-		LRK54_RS11585	0.75	+0.7
2,573,470	-		LRK54_RS11585	0.75	+0.5
2,573,470	-		LRK54_RS11585	0.75	+0.3
2,573,470	-		LRK54_RS11585	0.75	-1.1
2,573,470	-		LRK54_RS11585	0.75	-0.2
2,573,470	-		LRK54_RS11585	0.75	-0.2
2,573,470	-		LRK54_RS11585	0.75	-0.4
2,573,470	-		LRK54_RS11585	0.75	+1.3
2,573,470	-		LRK54_RS11585	0.75	+0.2
2,573,470	-		LRK54_RS11585	0.75	+1.2
2,573,470	-		LRK54_RS11585	0.75	-1.3
2,573,470	-		LRK54_RS11585	0.75	-0.2
2,573,472	+		LRK54_RS11585	0.75	-0.0
2,573,472	+		LRK54_RS11585	0.75	+1.8
2,573,472	+		LRK54_RS11585	0.75	-0.2
2,573,472	+		LRK54_RS11585	0.75	-1.5
2,573,472	+		LRK54_RS11585	0.75	-1.1
2,573,472	+		LRK54_RS11585	0.75	+0.6
2,573,472	+		LRK54_RS11585	0.75	-1.3
2,573,472	+		LRK54_RS11585	0.75	-0.1
2,573,472	+		LRK54_RS11585	0.75	+0.1
2,573,472	+		LRK54_RS11585	0.75	+1.0
2,573,472	+		LRK54_RS11585	0.75	+0.4
2,573,472	+		LRK54_RS11585	0.75	+0.1
2,573,472	+		LRK54_RS11585	0.75	-0.2
2,573,472	+		LRK54_RS11585	0.75	+0.6
2,573,472	+		LRK54_RS11585	0.75	-0.1
2,573,472	+		LRK54_RS11585	0.75	+0.8
2,573,472	+		LRK54_RS11585	0.75	-2.1
2,573,472	+		LRK54_RS11585	0.75	-0.1
2,573,472	+		LRK54_RS11585	0.75	-0.6
2,573,472	+		LRK54_RS11585	0.75	-0.6
2,573,472	+		LRK54_RS11585	0.75	+0.1
2,573,472	+		LRK54_RS11585	0.75	+0.2
2,573,472	+		LRK54_RS11585	0.75	+1.4
2,573,472	+		LRK54_RS11585	0.75	-1.4
2,573,472	+		LRK54_RS11585	0.75	-0.2
2,573,472	+		LRK54_RS11585	0.75	+3.5
2,573,472	+		LRK54_RS11585	0.75	+0.3
2,573,472	+		LRK54_RS11585	0.75	-0.6
2,573,472	+		LRK54_RS11585	0.75	+1.5
2,573,472	+		LRK54_RS11585	0.75	-0.5
2,573,472	+		LRK54_RS11585	0.75	+0.6
2,573,472	+		LRK54_RS11585	0.75	+0.6
2,573,472	+		LRK54_RS11585	0.75	+0.4
2,573,472	+		LRK54_RS11585	0.75	+0.8
2,573,473	-		LRK54_RS11585	0.75	+2.4
2,573,473	-		LRK54_RS11585	0.75	+0.9
2,573,473	-		LRK54_RS11585	0.75	+1.1
2,573,473	-		LRK54_RS11585	0.75	+0.2
2,573,473	-		LRK54_RS11585	0.75	+1.8
2,573,473	-		LRK54_RS11585	0.75	-0.3
2,573,473	-		LRK54_RS11585	0.75	+0.5
2,573,473	-		LRK54_RS11585	0.75	+1.2
2,573,473	-		LRK54_RS11585	0.75	-2.4
2,573,473	-		LRK54_RS11585	0.75	+1.2
2,573,473	-		LRK54_RS11585	0.75	-0.0
2,573,473	-		LRK54_RS11585	0.75	+0.2
2,573,473	-		LRK54_RS11585	0.75	-0.5
2,573,473	-		LRK54_RS11585	0.75	-2.0
2,573,473	-		LRK54_RS11585	0.75	+1.6
2,573,473	-		LRK54_RS11585	0.75	-0.7
2,573,473	-		LRK54_RS11585	0.75	-0.4
2,573,473	-		LRK54_RS11585	0.75	-0.9
2,573,473	-		LRK54_RS11585	0.75	+0.3
2,573,473	-		LRK54_RS11585	0.75	-0.0
2,573,473	-		LRK54_RS11585	0.75	+0.3
2,573,473	-		LRK54_RS11585	0.75	+1.8
2,573,473	-		LRK54_RS11585	0.75	-0.6
2,573,473	-		LRK54_RS11585	0.75	+1.5
2,573,625	+				+0.2
2,573,625	+				+1.1
2,573,625	+				+1.1
2,573,625	+				+1.8
2,573,625	+				+1.8
2,573,625	+				-0.5
2,573,625	+				+0.7
2,573,625	+				+0.0
2,573,626	-				-1.4
2,573,626	-				+1.1
2,573,626	-				+0.1
2,573,626	-				-0.4
2,573,626	-				+1.5
2,573,731	+				-0.1
2,573,731	+				+2.1
2,573,731	+				+1.2
2,573,731	+				-0.8
2,573,732	-				-0.5
2,573,732	-				+1.0
2,573,732	-				-0.8
2,573,732	-				+0.4
2,573,732	-				-0.2
2,573,784	+				-0.4
2,573,784	+				-1.2
2,573,784	+				+0.1
2,573,848	+				+1.1
2,573,848	+				-0.0
2,573,848	+				-0.9
2,573,848	+				-0.3
2,573,848	+				-0.6
2,573,848	+				-1.3
2,573,848	+				+0.7
2,574,719	+				+0.2
2,574,719	+				+0.2
2,574,719	+				-0.2
2,574,720	-				-0.5
2,574,720	-				-0.6
2,574,720	-				-0.8
2,574,720	-				+0.4
2,574,720	-				-1.6
2,574,843	+				+1.2
2,574,843	+				+0.1
2,574,843	+				-0.5
2,575,006	+		LRK54_RS11595	0.28	-0.1
2,575,006	+		LRK54_RS11595	0.28	-0.2
2,575,006	+		LRK54_RS11595	0.28	-0.5
2,575,006	+		LRK54_RS11595	0.28	+0.1
2,575,006	+		LRK54_RS11595	0.28	+0.0
2,575,007	-		LRK54_RS11595	0.28	+0.1
2,575,007	-		LRK54_RS11595	0.28	-0.0
2,575,007	-		LRK54_RS11595	0.28	+0.8
2,575,007	-		LRK54_RS11595	0.28	+2.0
2,575,007	-		LRK54_RS11595	0.28	+0.1
2,575,007	-		LRK54_RS11595	0.28	+0.6
2,575,007	-		LRK54_RS11595	0.28	+1.1
2,575,007	-		LRK54_RS11595	0.28	+1.8
2,575,007	-		LRK54_RS11595	0.28	-0.2
2,575,060	+		LRK54_RS11595	0.35	+0.0
2,575,061	-		LRK54_RS11595	0.35	+4.8
2,575,061	-		LRK54_RS11595	0.35	-1.1
2,575,078	+		LRK54_RS11595	0.38	+0.9
2,575,078	+		LRK54_RS11595	0.38	+0.0
2,575,078	+		LRK54_RS11595	0.38	+3.1
2,575,078	+		LRK54_RS11595	0.38	-0.3
2,575,079	-		LRK54_RS11595	0.38	-0.1
2,575,079	-		LRK54_RS11595	0.38	+0.6
2,575,079	-		LRK54_RS11595	0.38	+1.8
2,575,079	-		LRK54_RS11595	0.38	-0.1
2,575,079	-		LRK54_RS11595	0.38	+0.3
2,575,079	-		LRK54_RS11595	0.38	-1.0
2,575,105	+		LRK54_RS11595	0.41	-0.4
2,575,105	+		LRK54_RS11595	0.41	+0.7
2,575,105	+		LRK54_RS11595	0.41	+0.2
2,575,105	+		LRK54_RS11595	0.41	-0.2
2,575,105	+		LRK54_RS11595	0.41	+1.8
2,575,105	+		LRK54_RS11595	0.41	-0.6
2,575,105	+		LRK54_RS11595	0.41	+0.3
2,575,106	-		LRK54_RS11595	0.42	+0.5
2,575,106	-		LRK54_RS11595	0.42	+1.2
2,575,106	-		LRK54_RS11595	0.42	-0.3
2,575,276	+		LRK54_RS11595	0.65	+0.3
2,575,277	-		LRK54_RS11595	0.65	-1.5
2,575,277	-		LRK54_RS11595	0.65	-0.4
2,575,277	-		LRK54_RS11595	0.65	+0.2
2,575,277	-		LRK54_RS11595	0.65	-0.3
2,575,277	-		LRK54_RS11595	0.65	-1.8
2,575,277	-		LRK54_RS11595	0.65	+0.5
2,575,477	+				-0.1
2,575,477	+				-0.5
2,575,478	-				+0.9
2,575,574	+				-0.4
2,575,574	+				-0.5
2,575,574	+				-0.5
2,575,574	+				+0.5
2,575,574	+				+2.4
2,575,574	+				+0.8
2,575,575	-				+0.3
2,575,575	-				+0.2
2,575,575	-				-1.0
2,575,575	-				+0.6
2,575,575	-				-1.3
2,575,660	+				-0.5
2,575,660	+				-0.2
2,575,660	+				-0.2
2,575,661	-				+1.7
2,575,661	-				+2.0
2,575,661	-				-0.3
2,575,661	-				+0.6
2,575,661	-				+1.4
2,575,661	-				-0.6
2,575,687	+				+0.7
2,575,688	-				+0.4
2,575,688	-				+0.2
2,575,688	-				+1.8
2,575,706	+				+2.0