Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02728

Experiment: AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001
2,881,373	+				-1.2
2,881,381	-				-3.5
2,881,495	-				-0.1
2,881,495	-				+0.5
2,881,555	+		MPMX20_02727	0.16	+4.4
2,881,555	-		MPMX20_02727	0.16	-1.4
2,881,683	-		MPMX20_02727	0.32	+0.8
2,881,761	-		MPMX20_02727	0.41	+1.0
2,881,761	-		MPMX20_02727	0.41	+0.3
2,881,836	-		MPMX20_02727	0.50	-0.8
2,881,854	-		MPMX20_02727	0.53	+0.4
2,881,914	+		MPMX20_02727	0.60	+0.9
2,881,917	-		MPMX20_02727	0.60	-1.3
2,881,917	-		MPMX20_02727	0.60	+0.8
2,881,942	+		MPMX20_02727	0.63	-1.5
2,881,942	+		MPMX20_02727	0.63	+1.2
2,881,942	+		MPMX20_02727	0.63	+1.8
2,881,942	+		MPMX20_02727	0.63	+0.8
2,881,942	+		MPMX20_02727	0.63	-1.3
2,881,942	+		MPMX20_02727	0.63	-0.1
2,881,944	+		MPMX20_02727	0.64	+1.4
2,881,950	-		MPMX20_02727	0.64	-0.0
2,881,950	-		MPMX20_02727	0.64	-2.4
2,881,950	-		MPMX20_02727	0.64	-3.2
2,881,950	-		MPMX20_02727	0.64	-0.7
2,881,950	-		MPMX20_02727	0.64	-2.5
2,881,950	-		MPMX20_02727	0.64	+0.5
2,881,950	-		MPMX20_02727	0.64	+1.5
2,881,950	-		MPMX20_02727	0.64	-2.3
2,881,950	-		MPMX20_02727	0.64	-2.7
2,881,952	-		MPMX20_02727	0.65	+0.9
2,881,952	-		MPMX20_02727	0.65	+2.0
2,881,979	+		MPMX20_02727	0.68	+2.4
2,882,023	+		MPMX20_02727	0.73	+0.8
2,882,035	+		MPMX20_02727	0.75	-0.1
2,882,110	+		MPMX20_02727	0.84	+0.1
2,882,168	-				+0.2
2,882,202	+				-3.1
2,882,235	+				-1.2
2,882,272	+				+0.5
2,882,280	-				+2.8
2,882,292	+				-0.6
2,882,305	+				-1.1
2,882,314	-				-2.3
2,882,318	+				-1.6
2,882,326	-				-0.6
2,882,362	-				-2.0
2,882,391	-				-3.0
2,882,420	+				+0.2
2,882,592	+		MPMX20_02728	0.17	-0.5
2,882,630	-		MPMX20_02728	0.19	-0.5
2,882,638	+		MPMX20_02728	0.19	+1.5
2,882,684	-		MPMX20_02728	0.22	-1.5
2,882,697	+		MPMX20_02728	0.23	+0.6
2,882,758	-		MPMX20_02728	0.26	-3.8
2,882,769	+		MPMX20_02728	0.27	-0.7
2,882,783	-		MPMX20_02728	0.28	-3.4
2,882,787	+		MPMX20_02728	0.28	-0.6
2,882,800	+		MPMX20_02728	0.29	-3.9
2,882,808	-		MPMX20_02728	0.29	+1.9
2,882,933	+		MPMX20_02728	0.37	-1.1
2,882,958	+		MPMX20_02728	0.38	-2.8
2,882,990	-		MPMX20_02728	0.40	-0.2
2,883,000	+		MPMX20_02728	0.41	+1.0
2,883,000	+		MPMX20_02728	0.41	+1.3
2,883,008	-		MPMX20_02728	0.41	-0.4
2,883,054	-		MPMX20_02728	0.44	+1.1
2,883,125	+		MPMX20_02728	0.48	+0.4
2,883,129	+		MPMX20_02728	0.48	-0.8
2,883,129	+		MPMX20_02728	0.48	-3.8
2,883,207	+		MPMX20_02728	0.53	-0.1
2,883,261	-		MPMX20_02728	0.56	-1.0
2,883,278	+		MPMX20_02728	0.57	-1.3
2,883,283	+		MPMX20_02728	0.57	-1.5
2,883,283	+		MPMX20_02728	0.57	+0.2
2,883,291	-		MPMX20_02728	0.58	-1.1
2,883,291	-		MPMX20_02728	0.58	-3.4
2,883,292	-		MPMX20_02728	0.58	-3.5
2,883,336	+		MPMX20_02728	0.60	-0.4
2,883,344	-		MPMX20_02728	0.61	+2.8
2,883,344	-		MPMX20_02728	0.61	+0.7
2,883,346	+		MPMX20_02728	0.61	-0.6
2,883,416	+		MPMX20_02728	0.65	+0.5
2,883,416	+		MPMX20_02728	0.65	+0.4
2,883,416	+		MPMX20_02728	0.65	+0.6
2,883,416	+		MPMX20_02728	0.65	+0.9
2,883,416	+		MPMX20_02728	0.65	-3.5
2,883,416	+		MPMX20_02728	0.65	-3.7
2,883,424	-		MPMX20_02728	0.65	-3.7
2,883,424	-		MPMX20_02728	0.65	+5.2
2,883,540	+		MPMX20_02728	0.72	-0.2
2,883,614	+		MPMX20_02728	0.77	+1.7
2,883,622	-		MPMX20_02728	0.77	-0.2
2,883,622	-		MPMX20_02728	0.77	+0.4
2,883,627	+		MPMX20_02728	0.77	+1.2
2,883,649	-		MPMX20_02728	0.79	-4.4
2,883,654	+		MPMX20_02728	0.79	-1.3
2,883,667	-		MPMX20_02728	0.80	+1.1
2,883,770	+		MPMX20_02728	0.86	-1.4
2,883,774	+		MPMX20_02728	0.86	+0.6
2,883,779	+		MPMX20_02728	0.86	-2.3
2,883,779	+		MPMX20_02728	0.86	+0.3
2,883,779	+		MPMX20_02728	0.86	-3.1
2,883,779	+		MPMX20_02728	0.86	-0.2
2,883,784	+		MPMX20_02728	0.86	+0.0
2,883,787	-		MPMX20_02728	0.87	+1.5
2,883,787	-		MPMX20_02728	0.87	+0.2
2,883,787	-		MPMX20_02728	0.87	-3.3
2,883,787	-		MPMX20_02728	0.87	-0.5
2,883,787	-		MPMX20_02728	0.87	-1.7
2,883,787	-		MPMX20_02728	0.87	-2.1
2,883,787	-		MPMX20_02728	0.87	-2.2
2,883,871	+				+1.9
2,883,970	-				-1.3
2,883,972	+				-0.4
2,883,972	+				+0.9
2,883,975	-				-2.3
2,884,018	-				-1.0
2,884,032	+				-1.7
2,884,040	+				+1.1
2,884,040	-				+2.3
2,884,040	-				-0.5
2,884,084	-				+0.9
2,884,113	-				-2.3
2,884,224	+				-2.8
2,884,237	-				+0.5
2,884,239	+				+1.4
2,884,270	+		MPMX20_02729	0.11	-1.5
2,884,278	-		MPMX20_02729	0.15	+0.7
2,884,337	+		MPMX20_02729	0.43	+1.8
2,884,337	+		MPMX20_02729	0.43	+1.5
2,884,342	+		MPMX20_02729	0.46	+1.9
2,884,345	-		MPMX20_02729	0.47	+2.6
2,884,350	-		MPMX20_02729	0.50	-3.0
2,884,350	-		MPMX20_02729	0.50	+1.7
2,884,352	+		MPMX20_02729	0.50	+0.9
2,884,352	+		MPMX20_02729	0.50	-0.8
2,884,352	+		MPMX20_02729	0.50	-2.0
2,884,352	+		MPMX20_02729	0.50	+2.9
2,884,352	+		MPMX20_02729	0.50	-2.1
2,884,360	-		MPMX20_02729	0.54	-0.3
2,884,360	-		MPMX20_02729	0.54	+1.4
2,884,360	-		MPMX20_02729	0.54	+1.4
2,884,371	+		MPMX20_02729	0.60	+0.8
2,884,371	+		MPMX20_02729	0.60	-0.6
2,884,371	+		MPMX20_02729	0.60	-2.9
2,884,371	+		MPMX20_02729	0.60	+3.3
2,884,371	+		MPMX20_02729	0.60	-2.0
2,884,371	+		MPMX20_02729	0.60	-1.8
2,884,379	-		MPMX20_02729	0.63	-2.4
2,884,389	-		MPMX20_02729	0.68	+0.5
2,884,391	+		MPMX20_02729	0.69	-0.6
2,884,391	+		MPMX20_02729	0.69	-1.3
2,884,399	-		MPMX20_02729	0.73	+0.5
2,884,401	+		MPMX20_02729	0.74	-0.5
2,884,409	+		MPMX20_02729	0.78	-0.1
2,884,409	+		MPMX20_02729	0.78	-0.7
2,884,409	+		MPMX20_02729	0.78	-0.6
2,884,409	+		MPMX20_02729	0.78	+2.1
2,884,409	+		MPMX20_02729	0.78	+0.1
2,884,409	+		MPMX20_02729	0.78	-0.8
2,884,409	+		MPMX20_02729	0.78	+2.4
2,884,409	+		MPMX20_02729	0.78	-2.3
2,884,409	+		MPMX20_02729	0.78	+0.7
2,884,409	+		MPMX20_02729	0.78	+0.3
2,884,409	+		MPMX20_02729	0.78	-1.7
2,884,409	+		MPMX20_02729	0.78	+0.1
2,884,409	+		MPMX20_02729	0.78	-2.0
2,884,409	+		MPMX20_02729	0.78	-1.2
2,884,409	+		MPMX20_02729	0.78	+1.0
2,884,417	-		MPMX20_02729	0.81	+0.3
2,884,417	-		MPMX20_02729	0.81	-0.6
2,884,417	-		MPMX20_02729	0.81	+1.3
2,884,417	-		MPMX20_02729	0.81	-2.0
2,884,417	-		MPMX20_02729	0.81	-0.1
2,884,417	-		MPMX20_02729	0.81	+1.2
2,884,417	-		MPMX20_02729	0.81	-0.3
2,884,417	-		MPMX20_02729	0.81	-2.6
2,884,417	-		MPMX20_02729	0.81	-2.1
2,884,417	-		MPMX20_02729	0.81	+1.5
2,884,417	-		MPMX20_02729	0.81	-1.1
2,884,417	-		MPMX20_02729	0.81	-2.6
2,884,417	-		MPMX20_02729	0.81	-3.8
2,884,419	+		MPMX20_02729	0.82	+0.8
2,884,419	+		MPMX20_02729	0.82	+1.9
2,884,419	+		MPMX20_02729	0.82	-2.5
2,884,419	+		MPMX20_02729	0.82	-1.8
2,884,423	+		MPMX20_02729	0.84	-1.9
2,884,426	+		MPMX20_02729	0.86	+0.2
2,884,426	+		MPMX20_02729	0.86	-2.9
2,884,427	+		MPMX20_02729	0.86	-3.7
2,884,427	+		MPMX20_02729	0.86	+1.8
2,884,439	+				-2.6
2,884,439	+				+3.2
2,884,439	+				-1.4
2,884,439	+				+0.2
2,884,439	+				-1.6
2,884,439	+				+1.0
2,884,439	+				-1.4
2,884,439	+				-0.9
2,884,447	-				-1.2
2,884,447	-				+1.2
2,884,447	-				-2.9
2,884,447	-				-3.9
2,884,447	-				-0.4
2,884,473	+				-2.5
2,884,491	+				+2.1
2,884,492	+				+2.0
2,884,492	+				-3.1
2,884,509	-				-2.5
2,884,515	-				+1.0
2,884,528	-				+0.9
2,884,534	+				+0.2
2,884,542	-				-1.9
2,884,542	-				-2.0
2,884,542	-				+1.0
2,884,542	-				+1.3
2,884,548	-				-0.5
2,884,566	-				+2.6
2,884,579	+				+0.1
2,884,587	-				-0.4
2,884,601	+				+3.0
2,884,612	+				-0.1
2,884,617	+				+3.1
2,884,617	+				-1.5
2,884,617	-				-2.7
2,884,617	-				-1.5
2,884,622	+				-0.2
2,884,625	-				-0.8
2,884,627	-				+1.5
2,884,627	-				-3.1
2,884,627	-				+2.3
2,884,630	-				+0.1
2,884,648	+				-1.8
2,884,658	+				+3.2
2,884,666	-				-0.1
2,884,666	-				-2.1
2,884,689	+				+1.9
2,884,689	+				+0.9
2,884,697	-				-3.1
2,884,697	-				+1.4
2,884,697	-				-2.7
2,884,697	-				-2.2
2,884,697	-				+1.0
2,884,707	+				-0.4
2,884,707	+				-3.1
2,884,707	+				-0.4
2,884,715	-				+0.0
2,884,715	-				-1.8
2,884,715	-				+2.7
2,884,715	-				-0.2
2,884,715	-				-2.7
2,884,715	-				+0.4
2,884,715	-				-4.1
2,884,715	-				+0.2
2,884,725	-				-1.4
2,884,725	-				-1.4
2,884,725	-				-1.1
2,884,744	-				-1.4
2,884,746	-				-1.8
2,884,746	-				-0.4
2,884,746	-				+0.4
2,884,751	+				-1.5
2,884,751	+				+1.5
2,884,751	+				+0.8
2,884,751	+				+0.2
2,884,751	+				-2.6
2,884,751	+				+2.3
2,884,751	+				+0.2
2,884,751	+				+0.7
2,884,751	+				-1.7
2,884,751	+				-0.6
2,884,751	+				+1.0
2,884,756	+				+1.4
2,884,756	+				-0.4
2,884,759	-				+2.2
2,884,759	-				+0.9
2,884,759	-				-0.8
2,884,759	-				-3.0
2,884,759	-				-2.9
2,884,759	-				+0.2
2,884,759	-				-1.0
2,884,759	-				+0.4
2,884,759	-				-1.7
2,884,759	-				+1.1
2,884,759	-				-0.6
2,884,759	-				+1.2
2,884,759	-				-2.7
2,884,759	-				+2.0
2,884,759	-				-1.2
2,884,759	-				+1.6
2,884,759	-				+2.8
2,884,759	-				+2.0
2,884,759	-				+2.4
2,884,759	-				-1.1
2,884,759	-				-3.7
2,884,759	-				-4.1
2,884,759	-				+1.6
2,884,759	-				-1.3
2,884,759	-				+0.7
2,884,759	-				+2.0
2,884,759	-				+1.5
2,884,759	-				-1.8
2,884,759	-				+0.3
2,884,759	-				+0.6
2,884,759	-				-1.8
2,884,761	+				-0.9
2,884,761	+				+0.3
2,884,761	+				+0.3
2,884,761	+				+1.3
2,884,761	+				+1.3
2,884,761	+				-3.4
2,884,761	+				-1.5
2,884,761	+				-3.1
2,884,761	+				-3.5
2,884,761	+				+0.7
2,884,761	+				-1.5
2,884,761	+				+0.5
2,884,761	+				+0.8
2,884,761	+				+1.0
2,884,761	+				-2.5
2,884,761	+				+1.1
2,884,761	+				-1.5
2,884,761	+				-2.2
2,884,761	+				+0.4
2,884,761	+				-0.3
2,884,764	-				-0.2
2,884,764	-				-2.5
2,884,764	-				-3.6
2,884,764	-				+0.2
2,884,764	-				-3.2
2,884,764	-				-3.6
2,884,769	+				+0.3
2,884,769	+				+0.8
2,884,769	+				+1.0
2,884,769	+				-1.3
2,884,769	+				-0.7
2,884,769	+				-4.4
2,884,769	+				+0.9
2,884,769	+				-1.9
2,884,769	+				+1.8
2,884,769	+				+1.5
2,884,769	+				-1.0
2,884,769	+				-3.8
2,884,769	+				-0.9
2,884,769	+				-0.8
2,884,769	+				-3.2
2,884,769	+				-0.5
2,884,769	+				+2.8
2,884,769	+				+1.9
2,884,769	+				-3.4
2,884,769	+				+1.4
2,884,769	-				+0.6
2,884,769	-				-2.8
2,884,769	-				-3.3
2,884,769	-				-0.8
2,884,769	-				+1.1
2,884,769	-				-3.0
2,884,769	-				-0.4
2,884,769	-				-0.1
2,884,769	-				+1.1
2,884,769	-				-4.0
2,884,769	-				+0.8
2,884,769	-				+0.8
2,884,769	-				-0.6
2,884,769	-				-2.5
2,884,769	-				-3.0
2,884,769	-				-2.7
2,884,769	-				-1.1
2,884,769	-				-1.8
2,884,769	-				+1.4
2,884,769	-				+1.8
2,884,769	-				-0.6
2,884,769	-				-2.6
2,884,769	-				-1.4
2,884,769	-				-0.9
2,884,769	-				-2.4
2,884,769	-				-1.6
2,884,769	-				+2.6
2,884,769	-				+1.2
2,884,769	-				+0.9
2,884,769	-				+0.5
2,884,769	-				-1.5
2,884,769	-				-0.0
2,884,769	-				-0.6
2,884,769	-				-0.5
2,884,769	-				-0.6
2,884,769	-				-1.1
2,884,769	-				+1.2
2,884,769	-				+0.2
2,884,769	-				-3.6
2,884,769	-				-2.2
2,884,769	-				-0.6
2,884,769	-				+1.7
2,884,769	-				-1.8
2,884,769	-				-0.1
2,884,769	-				-3.7
2,884,769	-				-0.6
2,884,769	-				-1.6
2,884,769	-				-0.7
2,884,769	-				+2.7
2,884,769	-				-2.6
2,884,769	-				-1.9
2,884,771	+				+0.9
2,884,777	-				+0.3
2,884,777	-				-0.1
2,884,777	-				+1.4
2,884,777	-				-0.8
2,884,777	-				+0.4
2,884,777	-				+0.2
2,884,777	-				+0.8
2,884,777	-				-0.1
2,884,777	-				-0.8
2,884,777	-				-2.0
2,884,777	-				-1.0
2,884,777	-				-1.0
2,884,777	-				+1.6
2,884,777	-				-2.8
2,884,777	-				-1.8
2,884,777	-				-2.1
2,884,777	-				+1.6
2,884,777	-				-1.6
2,884,777	-				+2.0
2,884,777	-				+0.5
2,884,777	-				-2.2
2,884,777	-				-1.7
2,884,777	-				-0.1
2,884,777	-				-2.5
2,884,777	-				-3.4
2,884,777	-				+0.1
2,884,777	-				-1.1
2,884,777	-				-3.2
2,884,777	-				-2.9
2,884,777	-				-0.3
2,884,777	-				+0.3
2,884,777	-				-1.0
2,884,777	-				-0.4
2,884,777	-				-4.0
2,884,777	-				-0.6
2,884,777	-				-0.9
2,884,779	+				-3.7
2,884,779	-				+0.6
2,884,779	-				+1.3
2,884,779	-				-0.6
2,884,779	-				+0.9
2,884,787	-				+2.1
2,884,787	-				-2.7
2,884,837	-				-2.8
2,884,845	-				+0.1
2,884,858	-				-1.9
2,884,864	+				+1.3
2,884,870	+				-1.8
2,884,870	+				+0.9
2,884,870	+				+1.7
2,884,870	+				+1.1
2,884,876	+				-2.3
2,884,878	-				-1.6
2,884,878	-				+2.8
2,884,880	+				+0.3
2,884,885	+				-0.1
2,884,885	+				-1.9
2,884,911	+				+0.1
2,884,929	+				-0.9
2,884,929	+				+0.3
2,884,929	+				-1.3
2,884,932	+				-3.2
2,884,937	-				+0.7
2,884,937	-				-2.1
2,884,937	-				-2.1
2,884,937	-				-2.6
2,884,937	-				+2.4
2,884,937	-				+0.5
2,884,943	-				-1.0
2,884,957	+				+0.8
2,884,964	-				-2.7
2,884,965	-				+2.1
2,884,969	+				-3.4
2,884,969	+				-2.0
2,884,969	+				+1.9
2,884,977	-				+2.6