Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02856

Experiment: AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.01
3,012,244	+		MPMX20_02855	0.31	+0.3
3,012,250	+		MPMX20_02855	0.31	+0.2
3,012,252	-		MPMX20_02855	0.31	-0.4
3,012,408	-		MPMX20_02855	0.42	-0.5
3,012,425	+		MPMX20_02855	0.43	+0.6
3,012,433	+		MPMX20_02855	0.44	-1.9
3,012,464	+		MPMX20_02855	0.46	+3.1
3,012,491	+		MPMX20_02855	0.48	+1.0
3,012,518	+		MPMX20_02855	0.50	-1.6
3,012,518	+		MPMX20_02855	0.50	-0.1
3,012,518	+		MPMX20_02855	0.50	+0.2
3,012,526	-		MPMX20_02855	0.50	-0.5
3,012,526	-		MPMX20_02855	0.50	-0.0
3,012,553	+		MPMX20_02855	0.52	-0.3
3,012,553	+		MPMX20_02855	0.52	-0.4
3,012,553	+		MPMX20_02855	0.52	-0.6
3,012,553	+		MPMX20_02855	0.52	-0.9
3,012,561	-		MPMX20_02855	0.53	-1.2
3,012,572	+		MPMX20_02855	0.54	-1.6
3,012,572	+		MPMX20_02855	0.54	-1.0
3,012,572	+		MPMX20_02855	0.54	+0.2
3,012,572	+		MPMX20_02855	0.54	-0.5
3,012,580	-		MPMX20_02855	0.54	+0.2
3,012,580	-		MPMX20_02855	0.54	+0.1
3,012,591	-		MPMX20_02855	0.55	-4.5
3,012,607	+		MPMX20_02855	0.56	+0.8
3,012,658	-		MPMX20_02855	0.60	-0.7
3,012,658	-		MPMX20_02855	0.60	-0.7
3,012,660	+		MPMX20_02855	0.60	-0.8
3,012,663	-		MPMX20_02855	0.60	-1.7
3,012,691	-		MPMX20_02855	0.62	-0.1
3,012,730	-		MPMX20_02855	0.65	-0.3
3,012,768	+		MPMX20_02855	0.67	+0.2
3,012,798	+		MPMX20_02855	0.70	-0.3
3,012,819	-		MPMX20_02855	0.71	-2.6
3,012,852	-		MPMX20_02855	0.73	-1.7
3,012,852	-		MPMX20_02855	0.73	-2.5
3,012,854	+		MPMX20_02855	0.74	-1.2
3,012,862	-		MPMX20_02855	0.74	-0.4
3,012,952	-		MPMX20_02855	0.80	-0.9
3,012,963	+		MPMX20_02855	0.81	+0.2
3,012,990	-		MPMX20_02855	0.83	-0.3
3,012,994	+		MPMX20_02855	0.83	+0.8
3,012,997	-		MPMX20_02855	0.84	+0.6
3,013,002	-		MPMX20_02855	0.84	-2.3
3,013,002	-		MPMX20_02855	0.84	-1.2
3,013,021	+		MPMX20_02855	0.85	+0.4
3,013,021	+		MPMX20_02855	0.85	+1.0
3,013,021	+		MPMX20_02855	0.85	-0.2
3,013,021	+		MPMX20_02855	0.85	-0.8
3,013,029	-		MPMX20_02855	0.86	-1.6
3,013,037	-		MPMX20_02855	0.86	-1.3
3,013,076	+		MPMX20_02855	0.89	+0.4
3,013,110	+				-2.6
3,013,110	+				+0.0
3,013,208	-				-1.4
3,013,212	+				-0.3
3,013,214	+				-0.5
3,013,222	-				-0.4
3,013,261	+				-1.9
3,013,269	-				+0.0
3,013,278	+				-2.0
3,013,299	+		MPMX20_02856	0.14	-0.4
3,013,299	+		MPMX20_02856	0.14	-0.5
3,013,307	-		MPMX20_02856	0.16	-0.2
3,013,310	+		MPMX20_02856	0.17	-3.4
3,013,324	+		MPMX20_02856	0.20	-3.9
3,013,343	-		MPMX20_02856	0.25	-1.9
3,013,387	+		MPMX20_02856	0.36	-1.6
3,013,387	+		MPMX20_02856	0.36	-1.9
3,013,387	+		MPMX20_02856	0.36	+0.5
3,013,411	+		MPMX20_02856	0.41	-2.0
3,013,416	+		MPMX20_02856	0.43	-0.2
3,013,416	+		MPMX20_02856	0.43	-3.2
3,013,416	+		MPMX20_02856	0.43	-1.8
3,013,416	+		MPMX20_02856	0.43	-1.5
3,013,416	+		MPMX20_02856	0.43	-2.9
3,013,416	+		MPMX20_02856	0.43	+1.8
3,013,416	+		MPMX20_02856	0.43	-0.8
3,013,416	+		MPMX20_02856	0.43	+0.2
3,013,416	+		MPMX20_02856	0.43	-1.6
3,013,416	+		MPMX20_02856	0.43	-1.7
3,013,416	+		MPMX20_02856	0.43	-0.9
3,013,416	+		MPMX20_02856	0.43	-4.0
3,013,416	+		MPMX20_02856	0.43	-0.9
3,013,416	+		MPMX20_02856	0.43	-2.9
3,013,416	+		MPMX20_02856	0.43	-1.0
3,013,416	+		MPMX20_02856	0.43	-2.0
3,013,416	+		MPMX20_02856	0.43	-1.6
3,013,416	+		MPMX20_02856	0.43	-3.2
3,013,416	+		MPMX20_02856	0.43	-1.5
3,013,419	-		MPMX20_02856	0.43	-1.6
3,013,424	-		MPMX20_02856	0.45	-1.4
3,013,424	-		MPMX20_02856	0.45	+0.3
3,013,424	-		MPMX20_02856	0.45	-1.7
3,013,424	-		MPMX20_02856	0.45	-2.1
3,013,424	-		MPMX20_02856	0.45	-1.2
3,013,424	-		MPMX20_02856	0.45	-2.3
3,013,424	-		MPMX20_02856	0.45	-3.2
3,013,424	-		MPMX20_02856	0.45	-1.9
3,013,454	-		MPMX20_02856	0.52	+0.2
3,013,454	-		MPMX20_02856	0.52	-3.9
3,013,454	-		MPMX20_02856	0.52	-2.7
3,013,464	-		MPMX20_02856	0.55	+1.1
3,013,468	+		MPMX20_02856	0.56	-2.3
3,013,480	+		MPMX20_02856	0.59	-2.1
3,013,487	+		MPMX20_02856	0.60	-1.7
3,013,488	-		MPMX20_02856	0.60	-1.6
3,013,496	-		MPMX20_02856	0.62	-2.3
3,013,504	+		MPMX20_02856	0.64	+0.2
3,013,511	+		MPMX20_02856	0.66	-1.9
3,013,520	-		MPMX20_02856	0.68	-1.9
3,013,524	-		MPMX20_02856	0.69	-2.9
3,013,535	+		MPMX20_02856	0.72	-1.8
3,013,535	+		MPMX20_02856	0.72	-3.7
3,013,554	+		MPMX20_02856	0.77	-2.4
3,013,572	+		MPMX20_02856	0.81	-2.0
3,013,573	+		MPMX20_02856	0.81	-0.8
3,013,582	+		MPMX20_02856	0.84	-1.1
3,013,623	+				-2.0
3,013,639	-				-0.3
3,013,641	+				-0.2
3,013,641	+				-0.7
3,013,647	+				-0.9
3,013,649	-				-0.1
3,013,649	-				+2.1
3,013,649	-				-0.3
3,013,649	-				-0.2
3,013,649	-				-0.6
3,013,659	+				+0.4
3,013,660	+				-0.3
3,013,660	+				-1.0
3,013,665	+				-1.4
3,013,668	-				-2.2
3,013,673	-				-0.7
3,013,690	+		MPMX20_02857	0.10	-1.0
3,013,703	+		MPMX20_02857	0.14	-1.2
3,013,708	+		MPMX20_02857	0.15	-2.5
3,013,708	+		MPMX20_02857	0.15	-0.8
3,013,711	-		MPMX20_02857	0.16	-0.2
3,013,711	-		MPMX20_02857	0.16	+0.9
3,013,711	-		MPMX20_02857	0.16	-1.7
3,013,713	-		MPMX20_02857	0.17	-0.7
3,013,716	-		MPMX20_02857	0.17	-0.2
3,013,720	+		MPMX20_02857	0.18	-0.8
3,013,721	-		MPMX20_02857	0.19	-1.0
3,013,721	-		MPMX20_02857	0.19	-2.9
3,013,723	-		MPMX20_02857	0.19	-0.3
3,013,728	-		MPMX20_02857	0.21	-0.4
3,013,728	-		MPMX20_02857	0.21	-2.2
3,013,728	-		MPMX20_02857	0.21	-0.4
3,013,733	-		MPMX20_02857	0.22	-0.6
3,013,748	+		MPMX20_02857	0.26	-1.4
3,013,749	-		MPMX20_02857	0.26	-1.0
3,013,749	-		MPMX20_02857	0.26	-0.4
3,013,767	+		MPMX20_02857	0.31	-0.3
3,013,789	-		MPMX20_02857	0.37	-0.9
3,013,795	+		MPMX20_02857	0.39	-0.1
3,013,798	-		MPMX20_02857	0.40	-0.1
3,013,798	-		MPMX20_02857	0.40	-1.4
3,013,798	-		MPMX20_02857	0.40	-0.7
3,013,798	-		MPMX20_02857	0.40	-0.7
3,013,825	-		MPMX20_02857	0.47	+0.6
3,013,826	+		MPMX20_02857	0.48	-1.1
3,013,826	+		MPMX20_02857	0.48	-0.8
3,013,826	+		MPMX20_02857	0.48	-0.8
3,013,826	+		MPMX20_02857	0.48	-1.0
3,013,826	+		MPMX20_02857	0.48	-1.4
3,013,826	+		MPMX20_02857	0.48	-0.1
3,013,834	-		MPMX20_02857	0.50	+0.2
3,013,834	-		MPMX20_02857	0.50	+0.1
3,013,834	-		MPMX20_02857	0.50	-2.6
3,013,857	-		MPMX20_02857	0.56	-1.2
3,013,868	+		MPMX20_02857	0.59	+0.8
3,013,908	+		MPMX20_02857	0.70	+1.6
3,013,908	+		MPMX20_02857	0.70	+1.2
3,013,916	-		MPMX20_02857	0.72	-0.8
3,013,919	-		MPMX20_02857	0.73	-0.8
3,013,921	+		MPMX20_02857	0.74	+0.1
3,013,923	+		MPMX20_02857	0.74	-1.2
3,013,929	-		MPMX20_02857	0.76	+0.2
3,013,958	+		MPMX20_02857	0.84	-2.0
3,013,966	+		MPMX20_02857	0.86	+0.2
3,013,973	+		MPMX20_02857	0.88	-0.3
3,013,973	-		MPMX20_02857	0.88	-0.4
3,014,042	+				+0.7
3,014,042	+				-1.5
3,014,042	+				+0.3
3,014,042	+				-1.6
3,014,042	+				-0.4
3,014,050	-				-0.1
3,014,050	-				-0.5
3,014,050	-				-3.3
3,014,050	-				-0.4
3,014,050	-				+0.5
3,014,050	-				+0.7
3,014,050	-				+0.8
3,014,050	-				-0.6
3,014,052	-				+0.1
3,014,052	-				-1.4
3,014,087	+				+0.2
3,014,088	-				+0.2
3,014,095	-				+0.7
3,014,097	+				-1.0
3,014,101	-				-1.9
3,014,105	-				+0.1
3,014,105	-				-0.6
3,014,105	-				+0.5
3,014,115	+				-0.7
3,014,123	-				-2.4
3,014,123	-				-0.9
3,014,123	-				+0.6
3,014,123	-				-0.4
3,014,123	-				+0.0
3,014,123	-				-1.1
3,014,123	-				+0.7
3,014,123	-				-0.2
3,014,170	-				+0.2
3,014,203	+				-0.4
3,014,209	+				+0.4
3,014,211	-				+1.2
3,014,232	+		MPMX20_02858	0.10	+0.8
3,014,279	-		MPMX20_02858	0.13	-0.2
3,014,373	+		MPMX20_02858	0.20	+1.4
3,014,420	-		MPMX20_02858	0.23	+0.3
3,014,481	+		MPMX20_02858	0.27	+0.0
3,014,488	+		MPMX20_02858	0.27	-1.4
3,014,489	-		MPMX20_02858	0.27	-0.5
3,014,496	-		MPMX20_02858	0.28	+0.2
3,014,497	+		MPMX20_02858	0.28	-0.3
3,014,497	+		MPMX20_02858	0.28	-0.4
3,014,497	+		MPMX20_02858	0.28	+0.2
3,014,497	+		MPMX20_02858	0.28	+0.9
3,014,505	-		MPMX20_02858	0.29	+0.4
3,014,505	-		MPMX20_02858	0.29	-0.6
3,014,505	-		MPMX20_02858	0.29	-0.6
3,014,508	+		MPMX20_02858	0.29	+1.2
3,014,564	+		MPMX20_02858	0.33	+0.1
3,014,572	-		MPMX20_02858	0.33	+0.2
3,014,616	+		MPMX20_02858	0.36	-1.2
3,014,619	+		MPMX20_02858	0.36	+0.1
3,014,626	+		MPMX20_02858	0.37	+1.0
3,014,632	+		MPMX20_02858	0.37	-0.2
3,014,634	-		MPMX20_02858	0.37	+1.4
3,014,634	-		MPMX20_02858	0.37	-1.3
3,014,634	-		MPMX20_02858	0.37	+0.5
3,014,635	-		MPMX20_02858	0.37	-2.3