Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02760

Experiment: AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02759 and MPMX20_02760 are separated by 55 nucleotidesMPMX20_02760 and MPMX20_02761 are separated by 119 nucleotides MPMX20_02759: MPMX20_02759 - Pyruvate kinase II, at 2,915,163 to 2,916,605 _02759 MPMX20_02760: MPMX20_02760 - Lipid A biosynthesis myristoyltransferase, at 2,916,661 to 2,917,632 _02760 MPMX20_02761: MPMX20_02761 - Murein DD-endopeptidase MepM, at 2,917,752 to 2,919,071 _02761 Position (kb) 2916 2917 2918Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2915.666 kb on + strand, within MPMX20_02759at 2915.681 kb on - strand, within MPMX20_02759at 2915.687 kb on - strand, within MPMX20_02759at 2915.777 kb on - strand, within MPMX20_02759at 2915.959 kb on + strand, within MPMX20_02759at 2915.972 kb on - strand, within MPMX20_02759at 2916.053 kb on - strand, within MPMX20_02759at 2916.053 kb on - strand, within MPMX20_02759at 2916.063 kb on - strand, within MPMX20_02759at 2916.063 kb on - strand, within MPMX20_02759at 2916.074 kb on + strand, within MPMX20_02759at 2916.074 kb on + strand, within MPMX20_02759at 2916.074 kb on + strand, within MPMX20_02759at 2916.111 kb on - strand, within MPMX20_02759at 2916.140 kb on - strand, within MPMX20_02759at 2916.159 kb on - strand, within MPMX20_02759at 2916.218 kb on - strand, within MPMX20_02759at 2916.277 kb on + strand, within MPMX20_02759at 2916.295 kb on - strand, within MPMX20_02759at 2916.346 kb on + strand, within MPMX20_02759at 2916.358 kb on + strand, within MPMX20_02759at 2916.433 kb on + strand, within MPMX20_02759at 2916.523 kb on - strandat 2916.616 kb on + strandat 2916.631 kb on + strandat 2916.681 kb on - strandat 2917.644 kb on - strandat 2917.809 kb on + strandat 2917.898 kb on - strand, within MPMX20_02761at 2917.966 kb on + strand, within MPMX20_02761at 2917.996 kb on - strand, within MPMX20_02761at 2917.996 kb on - strand, within MPMX20_02761at 2918.040 kb on - strand, within MPMX20_02761at 2918.093 kb on + strand, within MPMX20_02761at 2918.159 kb on + strand, within MPMX20_02761at 2918.174 kb on + strand, within MPMX20_02761at 2918.237 kb on + strand, within MPMX20_02761at 2918.295 kb on + strand, within MPMX20_02761at 2918.339 kb on - strand, within MPMX20_02761at 2918.372 kb on - strand, within MPMX20_02761at 2918.428 kb on + strand, within MPMX20_02761at 2918.431 kb on - strand, within MPMX20_02761

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Per-strain Table

Position Strand Gene LocusTag Fraction AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01
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2,915,666 + MPMX20_02759 0.35 -1.4
2,915,681 - MPMX20_02759 0.36 +1.9
2,915,687 - MPMX20_02759 0.36 -1.0
2,915,777 - MPMX20_02759 0.43 -0.6
2,915,959 + MPMX20_02759 0.55 -0.5
2,915,972 - MPMX20_02759 0.56 +0.0
2,916,053 - MPMX20_02759 0.62 -1.1
2,916,053 - MPMX20_02759 0.62 -0.6
2,916,063 - MPMX20_02759 0.62 +0.5
2,916,063 - MPMX20_02759 0.62 +0.4
2,916,074 + MPMX20_02759 0.63 +0.2
2,916,074 + MPMX20_02759 0.63 -0.8
2,916,074 + MPMX20_02759 0.63 +0.3
2,916,111 - MPMX20_02759 0.66 -2.0
2,916,140 - MPMX20_02759 0.68 +0.3
2,916,159 - MPMX20_02759 0.69 -0.8
2,916,218 - MPMX20_02759 0.73 -0.6
2,916,277 + MPMX20_02759 0.77 +0.6
2,916,295 - MPMX20_02759 0.78 -0.9
2,916,346 + MPMX20_02759 0.82 +1.8
2,916,358 + MPMX20_02759 0.83 -0.2
2,916,433 + MPMX20_02759 0.88 -0.7
2,916,523 - -1.0
2,916,616 + -0.7
2,916,631 + +0.0
2,916,681 - -2.9
2,917,644 - -0.4
2,917,809 + -0.3
2,917,898 - MPMX20_02761 0.11 -0.0
2,917,966 + MPMX20_02761 0.16 +1.3
2,917,996 - MPMX20_02761 0.18 +0.1
2,917,996 - MPMX20_02761 0.18 -0.3
2,918,040 - MPMX20_02761 0.22 -1.6
2,918,093 + MPMX20_02761 0.26 -1.4
2,918,159 + MPMX20_02761 0.31 -0.5
2,918,174 + MPMX20_02761 0.32 -1.3
2,918,237 + MPMX20_02761 0.37 -0.3
2,918,295 + MPMX20_02761 0.41 -0.3
2,918,339 - MPMX20_02761 0.44 +0.6
2,918,372 - MPMX20_02761 0.47 -0.5
2,918,428 + MPMX20_02761 0.51 -0.6
2,918,431 - MPMX20_02761 0.51 +0.2

Or see this region's nucleotide sequence