Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01381

Experiment: AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01379 and MPMX20_01380 are separated by 105 nucleotidesMPMX20_01380 and MPMX20_01381 are separated by 304 nucleotidesMPMX20_01381 and MPMX20_01382 are separated by 61 nucleotides MPMX20_01379: MPMX20_01379 - Zinc transporter ZitB, at 1,441,286 to 1,442,224 _01379 MPMX20_01380: MPMX20_01380 - hypothetical protein, at 1,442,330 to 1,442,710 _01380 MPMX20_01381: MPMX20_01381 - Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive, at 1,443,015 to 1,444,067 _01381 MPMX20_01382: MPMX20_01382 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, at 1,444,129 to 1,444,881 _01382 Position (kb) 1443 1444 1445Strain fitness (log2 ratio) -2 -1 0 1 2at 1442.076 kb on - strand, within MPMX20_01379at 1442.102 kb on + strand, within MPMX20_01379at 1442.142 kb on - strandat 1442.142 kb on - strandat 1442.164 kb on + strandat 1442.328 kb on + strandat 1442.485 kb on - strand, within MPMX20_01380at 1442.502 kb on + strand, within MPMX20_01380at 1442.517 kb on + strand, within MPMX20_01380at 1442.525 kb on - strand, within MPMX20_01380at 1442.748 kb on - strandat 1442.809 kb on - strandat 1443.152 kb on + strand, within MPMX20_01381at 1443.160 kb on - strand, within MPMX20_01381at 1443.386 kb on - strand, within MPMX20_01381at 1443.554 kb on - strand, within MPMX20_01381at 1443.589 kb on + strand, within MPMX20_01381at 1443.589 kb on + strand, within MPMX20_01381at 1443.645 kb on - strand, within MPMX20_01381at 1443.737 kb on - strand, within MPMX20_01381at 1443.756 kb on + strand, within MPMX20_01381at 1443.756 kb on + strand, within MPMX20_01381at 1443.937 kb on - strand, within MPMX20_01381at 1443.968 kb on + strandat 1444.000 kb on - strandat 1444.136 kb on + strandat 1444.184 kb on + strandat 1444.184 kb on + strandat 1444.192 kb on - strandat 1444.239 kb on - strand, within MPMX20_01382at 1444.261 kb on - strand, within MPMX20_01382at 1444.322 kb on + strand, within MPMX20_01382at 1444.330 kb on - strand, within MPMX20_01382at 1444.514 kb on - strand, within MPMX20_01382at 1444.519 kb on - strand, within MPMX20_01382at 1444.585 kb on + strand, within MPMX20_01382at 1444.602 kb on - strand, within MPMX20_01382at 1444.660 kb on - strand, within MPMX20_01382at 1444.711 kb on + strand, within MPMX20_01382at 1444.735 kb on + strand, within MPMX20_01382at 1444.959 kb on + strandat 1444.959 kb on + strandat 1444.959 kb on + strandat 1444.959 kb on + strandat 1444.960 kb on + strandat 1444.962 kb on - strandat 1444.962 kb on - strandat 1444.962 kb on - strandat 1444.962 kb on - strandat 1444.962 kb on - strandat 1444.967 kb on - strandat 1444.967 kb on - strandat 1444.967 kb on - strandat 1444.967 kb on - strandat 1444.986 kb on + strandat 1445.004 kb on + strandat 1445.012 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01
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1,442,076 - MPMX20_01379 0.84 -1.3
1,442,102 + MPMX20_01379 0.87 +0.4
1,442,142 - +2.1
1,442,142 - -0.7
1,442,164 + -1.5
1,442,328 + -2.3
1,442,485 - MPMX20_01380 0.41 +2.0
1,442,502 + MPMX20_01380 0.45 -0.7
1,442,517 + MPMX20_01380 0.49 +1.0
1,442,525 - MPMX20_01380 0.51 +0.7
1,442,748 - -0.6
1,442,809 - +0.1
1,443,152 + MPMX20_01381 0.13 -1.4
1,443,160 - MPMX20_01381 0.14 +2.1
1,443,386 - MPMX20_01381 0.35 +1.0
1,443,554 - MPMX20_01381 0.51 -0.1
1,443,589 + MPMX20_01381 0.55 +0.2
1,443,589 + MPMX20_01381 0.55 -2.0
1,443,645 - MPMX20_01381 0.60 -0.6
1,443,737 - MPMX20_01381 0.69 +1.4
1,443,756 + MPMX20_01381 0.70 -0.6
1,443,756 + MPMX20_01381 0.70 +2.0
1,443,937 - MPMX20_01381 0.88 -0.3
1,443,968 + -0.5
1,444,000 - -1.1
1,444,136 + -1.4
1,444,184 + +0.6
1,444,184 + -0.4
1,444,192 - -1.0
1,444,239 - MPMX20_01382 0.15 -1.2
1,444,261 - MPMX20_01382 0.18 -1.5
1,444,322 + MPMX20_01382 0.26 -2.3
1,444,330 - MPMX20_01382 0.27 +0.3
1,444,514 - MPMX20_01382 0.51 +0.3
1,444,519 - MPMX20_01382 0.52 +0.0
1,444,585 + MPMX20_01382 0.61 -1.2
1,444,602 - MPMX20_01382 0.63 -2.5
1,444,660 - MPMX20_01382 0.71 -1.0
1,444,711 + MPMX20_01382 0.77 -0.8
1,444,735 + MPMX20_01382 0.80 -1.1
1,444,959 + +0.0
1,444,959 + +0.6
1,444,959 + -0.2
1,444,959 + -1.5
1,444,960 + -0.3
1,444,962 - +2.1
1,444,962 - +0.2
1,444,962 - +1.3
1,444,962 - -0.1
1,444,962 - +0.2
1,444,967 - -0.6
1,444,967 - +0.1
1,444,967 - -0.9
1,444,967 - +0.5
1,444,986 + -0.5
1,445,004 + -1.6
1,445,012 - +0.7

Or see this region's nucleotide sequence