Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04640

Experiment: AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04639 and MPMX20_04640 are separated by 80 nucleotidesMPMX20_04640 and MPMX20_04641 overlap by 1 nucleotidesMPMX20_04641 and MPMX20_04642 are separated by 47 nucleotides MPMX20_04639: MPMX20_04639 - Phosphate-binding protein PstS, at 4,859,842 to 4,860,882 _04639 MPMX20_04640: MPMX20_04640 - Phosphate transport system permease protein PstC, at 4,860,963 to 4,861,922 _04640 MPMX20_04641: MPMX20_04641 - Phosphate transport system permease protein PstA, at 4,861,922 to 4,862,812 _04641 MPMX20_04642: MPMX20_04642 - Phosphate import ATP-binding protein PstB, at 4,862,860 to 4,863,633 _04642 Position (kb) 4860 4861 4862Strain fitness (log2 ratio) -3 -2 -1 0 1at 4860.154 kb on + strand, within MPMX20_04639at 4860.212 kb on + strand, within MPMX20_04639at 4860.229 kb on - strand, within MPMX20_04639at 4860.491 kb on + strand, within MPMX20_04639at 4860.802 kb on - strandat 4860.825 kb on + strandat 4860.858 kb on - strandat 4861.163 kb on + strand, within MPMX20_04640at 4861.163 kb on + strand, within MPMX20_04640at 4861.254 kb on - strand, within MPMX20_04640at 4861.298 kb on + strand, within MPMX20_04640at 4861.364 kb on - strand, within MPMX20_04640at 4861.724 kb on + strand, within MPMX20_04640at 4861.834 kb on + strandat 4861.880 kb on + strandat 4861.950 kb on - strandat 4862.009 kb on + strandat 4862.020 kb on + strand, within MPMX20_04641at 4862.047 kb on + strand, within MPMX20_04641at 4862.047 kb on + strand, within MPMX20_04641at 4862.047 kb on + strand, within MPMX20_04641at 4862.055 kb on - strand, within MPMX20_04641at 4862.055 kb on - strand, within MPMX20_04641at 4862.263 kb on + strand, within MPMX20_04641at 4862.435 kb on + strand, within MPMX20_04641at 4862.435 kb on + strand, within MPMX20_04641at 4862.629 kb on + strand, within MPMX20_04641at 4862.637 kb on - strand, within MPMX20_04641at 4862.727 kb on + strandat 4862.735 kb on + strandat 4862.742 kb on + strandat 4862.742 kb on + strandat 4862.742 kb on + strandat 4862.742 kb on + strandat 4862.742 kb on + strandat 4862.805 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001
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4,860,154 + MPMX20_04639 0.30 -0.9
4,860,212 + MPMX20_04639 0.36 -0.4
4,860,229 - MPMX20_04639 0.37 +0.2
4,860,491 + MPMX20_04639 0.62 -0.6
4,860,802 - -1.9
4,860,825 + -3.7
4,860,858 - -2.5
4,861,163 + MPMX20_04640 0.21 -1.9
4,861,163 + MPMX20_04640 0.21 -3.6
4,861,254 - MPMX20_04640 0.30 +0.1
4,861,298 + MPMX20_04640 0.35 -0.3
4,861,364 - MPMX20_04640 0.42 -0.8
4,861,724 + MPMX20_04640 0.79 +1.4
4,861,834 + -1.2
4,861,880 + +0.2
4,861,950 - -0.5
4,862,009 + +0.2
4,862,020 + MPMX20_04641 0.11 -1.6
4,862,047 + MPMX20_04641 0.14 -1.7
4,862,047 + MPMX20_04641 0.14 -0.9
4,862,047 + MPMX20_04641 0.14 -1.4
4,862,055 - MPMX20_04641 0.15 -0.9
4,862,055 - MPMX20_04641 0.15 -1.3
4,862,263 + MPMX20_04641 0.38 -1.5
4,862,435 + MPMX20_04641 0.58 +0.5
4,862,435 + MPMX20_04641 0.58 -1.0
4,862,629 + MPMX20_04641 0.79 -1.8
4,862,637 - MPMX20_04641 0.80 -1.0
4,862,727 + +1.0
4,862,735 + -0.4
4,862,742 + +0.1
4,862,742 + +0.1
4,862,742 + +1.0
4,862,742 + -0.4
4,862,742 + -0.1
4,862,805 - -3.1

Or see this region's nucleotide sequence