Experiment: AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.01
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04642 and MPMX20_04643 are separated by 14 nucleotides MPMX20_04643 and MPMX20_04644 are separated by 84 nucleotides MPMX20_04644 and MPMX20_04645 are separated by 163 nucleotides
MPMX20_04642: MPMX20_04642 - Phosphate import ATP-binding protein PstB, at 4,862,860 to 4,863,633
_04642
MPMX20_04643: MPMX20_04643 - Phosphate-specific transport system accessory protein PhoU, at 4,863,648 to 4,864,373
_04643
MPMX20_04644: MPMX20_04644 - 6-phosphogluconate phosphatase, at 4,864,458 to 4,865,123
_04644
MPMX20_04645: MPMX20_04645 - Adenine permease AdeP, at 4,865,287 to 4,866,627
_04645
Position (kb)
4864
4865
4866 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4863.686 kb on + strand at 4863.686 kb on + strand at 4863.686 kb on + strand at 4863.686 kb on + strand at 4863.686 kb on + strand at 4864.529 kb on - strand, within MPMX20_04644 at 4864.672 kb on + strand, within MPMX20_04644 at 4864.773 kb on + strand, within MPMX20_04644 at 4864.805 kb on - strand, within MPMX20_04644 at 4864.820 kb on - strand, within MPMX20_04644 at 4864.870 kb on + strand, within MPMX20_04644 at 4864.936 kb on - strand, within MPMX20_04644 at 4864.956 kb on + strand, within MPMX20_04644 at 4864.981 kb on + strand, within MPMX20_04644 at 4864.981 kb on + strand, within MPMX20_04644 at 4864.989 kb on - strand, within MPMX20_04644 at 4864.989 kb on - strand, within MPMX20_04644 at 4864.989 kb on - strand, within MPMX20_04644 at 4865.013 kb on - strand, within MPMX20_04644 at 4865.067 kb on - strand at 4865.074 kb on - strand at 4865.079 kb on - strand at 4865.081 kb on + strand at 4865.294 kb on + strand at 4865.308 kb on + strand at 4865.325 kb on + strand at 4865.325 kb on + strand at 4865.325 kb on + strand at 4865.328 kb on - strand at 4865.342 kb on + strand at 4865.386 kb on - strand at 4865.423 kb on - strand, within MPMX20_04645 at 4865.506 kb on - strand, within MPMX20_04645 at 4865.513 kb on + strand, within MPMX20_04645 at 4865.516 kb on - strand, within MPMX20_04645 at 4865.539 kb on - strand, within MPMX20_04645 at 4865.741 kb on + strand, within MPMX20_04645 at 4865.749 kb on - strand, within MPMX20_04645 at 4865.805 kb on - strand, within MPMX20_04645 at 4865.833 kb on - strand, within MPMX20_04645 at 4865.840 kb on + strand, within MPMX20_04645 at 4865.913 kb on + strand, within MPMX20_04645 at 4865.950 kb on - strand, within MPMX20_04645 at 4865.959 kb on + strand, within MPMX20_04645 at 4865.964 kb on + strand, within MPMX20_04645 at 4865.969 kb on + strand, within MPMX20_04645 at 4866.073 kb on - strand, within MPMX20_04645
Per-strain Table
Position Strand Gene LocusTag Fraction AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.01 remove 4,863,686 + +0.1 4,863,686 + -1.3 4,863,686 + -1.1 4,863,686 + -0.6 4,863,686 + +0.1 4,864,529 - MPMX20_04644 0.11 -2.5 4,864,672 + MPMX20_04644 0.32 +0.2 4,864,773 + MPMX20_04644 0.47 +0.6 4,864,805 - MPMX20_04644 0.52 -2.4 4,864,820 - MPMX20_04644 0.54 +0.3 4,864,870 + MPMX20_04644 0.62 -0.1 4,864,936 - MPMX20_04644 0.72 -0.6 4,864,956 + MPMX20_04644 0.75 +1.6 4,864,981 + MPMX20_04644 0.79 -0.0 4,864,981 + MPMX20_04644 0.79 -1.0 4,864,989 - MPMX20_04644 0.80 +0.7 4,864,989 - MPMX20_04644 0.80 -0.4 4,864,989 - MPMX20_04644 0.80 -0.8 4,865,013 - MPMX20_04644 0.83 -0.0 4,865,067 - -1.1 4,865,074 - -0.9 4,865,079 - +0.2 4,865,081 + +1.9 4,865,294 + +1.9 4,865,308 + -0.4 4,865,325 + -1.0 4,865,325 + +0.8 4,865,325 + +0.0 4,865,328 - -0.8 4,865,342 + +1.4 4,865,386 - +0.1 4,865,423 - MPMX20_04645 0.10 -1.8 4,865,506 - MPMX20_04645 0.16 -0.7 4,865,513 + MPMX20_04645 0.17 -0.7 4,865,516 - MPMX20_04645 0.17 -1.1 4,865,539 - MPMX20_04645 0.19 -1.6 4,865,741 + MPMX20_04645 0.34 +0.8 4,865,749 - MPMX20_04645 0.34 -1.2 4,865,805 - MPMX20_04645 0.39 +0.7 4,865,833 - MPMX20_04645 0.41 -0.3 4,865,840 + MPMX20_04645 0.41 +1.4 4,865,913 + MPMX20_04645 0.47 -0.3 4,865,950 - MPMX20_04645 0.49 +0.0 4,865,959 + MPMX20_04645 0.50 +0.9 4,865,964 + MPMX20_04645 0.50 +0.3 4,865,969 + MPMX20_04645 0.51 +1.4 4,866,073 - MPMX20_04645 0.59 -1.1
Or see this region's nucleotide sequence