Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04643

Experiment: AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04641 and MPMX20_04642 are separated by 47 nucleotidesMPMX20_04642 and MPMX20_04643 are separated by 14 nucleotidesMPMX20_04643 and MPMX20_04644 are separated by 84 nucleotidesMPMX20_04644 and MPMX20_04645 are separated by 163 nucleotides MPMX20_04641: MPMX20_04641 - Phosphate transport system permease protein PstA, at 4,861,922 to 4,862,812 _04641 MPMX20_04642: MPMX20_04642 - Phosphate import ATP-binding protein PstB, at 4,862,860 to 4,863,633 _04642 MPMX20_04643: MPMX20_04643 - Phosphate-specific transport system accessory protein PhoU, at 4,863,648 to 4,864,373 _04643 MPMX20_04644: MPMX20_04644 - 6-phosphogluconate phosphatase, at 4,864,458 to 4,865,123 _04644 MPMX20_04645: MPMX20_04645 - Adenine permease AdeP, at 4,865,287 to 4,866,627 _04645 Position (kb) 4863 4864 4865Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4862.727 kb on + strandat 4862.735 kb on + strandat 4862.742 kb on + strandat 4862.742 kb on + strandat 4862.742 kb on + strandat 4862.742 kb on + strandat 4862.742 kb on + strandat 4862.805 kb on - strandat 4863.047 kb on + strand, within MPMX20_04642at 4863.047 kb on + strand, within MPMX20_04642at 4863.055 kb on - strand, within MPMX20_04642at 4863.055 kb on - strand, within MPMX20_04642at 4863.055 kb on - strand, within MPMX20_04642at 4863.055 kb on - strand, within MPMX20_04642at 4863.264 kb on - strand, within MPMX20_04642at 4863.414 kb on - strand, within MPMX20_04642at 4863.686 kb on + strandat 4863.686 kb on + strandat 4863.686 kb on + strandat 4863.686 kb on + strandat 4863.686 kb on + strandat 4864.529 kb on - strand, within MPMX20_04644at 4864.672 kb on + strand, within MPMX20_04644at 4864.773 kb on + strand, within MPMX20_04644at 4864.805 kb on - strand, within MPMX20_04644at 4864.820 kb on - strand, within MPMX20_04644at 4864.870 kb on + strand, within MPMX20_04644at 4864.936 kb on - strand, within MPMX20_04644at 4864.956 kb on + strand, within MPMX20_04644at 4864.981 kb on + strand, within MPMX20_04644at 4864.981 kb on + strand, within MPMX20_04644at 4864.989 kb on - strand, within MPMX20_04644at 4864.989 kb on - strand, within MPMX20_04644at 4864.989 kb on - strand, within MPMX20_04644at 4865.013 kb on - strand, within MPMX20_04644at 4865.067 kb on - strandat 4865.074 kb on - strandat 4865.079 kb on - strandat 4865.081 kb on + strandat 4865.294 kb on + strandat 4865.308 kb on + strandat 4865.325 kb on + strandat 4865.325 kb on + strandat 4865.325 kb on + strandat 4865.328 kb on - strandat 4865.342 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001
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4,862,727 + -3.1
4,862,735 + +1.1
4,862,742 + +0.4
4,862,742 + -0.1
4,862,742 + -3.3
4,862,742 + -0.1
4,862,742 + +0.2
4,862,805 - -2.7
4,863,047 + MPMX20_04642 0.24 -0.4
4,863,047 + MPMX20_04642 0.24 -1.2
4,863,055 - MPMX20_04642 0.25 -1.4
4,863,055 - MPMX20_04642 0.25 -1.1
4,863,055 - MPMX20_04642 0.25 +0.1
4,863,055 - MPMX20_04642 0.25 -0.1
4,863,264 - MPMX20_04642 0.52 -0.3
4,863,414 - MPMX20_04642 0.72 +0.6
4,863,686 + +0.6
4,863,686 + -0.8
4,863,686 + -0.7
4,863,686 + -2.2
4,863,686 + +0.6
4,864,529 - MPMX20_04644 0.11 -2.1
4,864,672 + MPMX20_04644 0.32 +2.0
4,864,773 + MPMX20_04644 0.47 -4.3
4,864,805 - MPMX20_04644 0.52 +1.3
4,864,820 - MPMX20_04644 0.54 +0.7
4,864,870 + MPMX20_04644 0.62 +0.9
4,864,936 - MPMX20_04644 0.72 +1.0
4,864,956 + MPMX20_04644 0.75 -1.6
4,864,981 + MPMX20_04644 0.79 +0.2
4,864,981 + MPMX20_04644 0.79 +0.6
4,864,989 - MPMX20_04644 0.80 +2.1
4,864,989 - MPMX20_04644 0.80 +0.0
4,864,989 - MPMX20_04644 0.80 +0.5
4,865,013 - MPMX20_04644 0.83 +1.7
4,865,067 - -2.7
4,865,074 - -2.4
4,865,079 - +1.0
4,865,081 + +1.8
4,865,294 + -2.7
4,865,308 + +0.1
4,865,325 + +2.4
4,865,325 + +0.3
4,865,325 + -0.5
4,865,328 - -0.4
4,865,342 + +2.5

Or see this region's nucleotide sequence