Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02615

Experiment: AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001
2,749,454	+		MPMX20_02614	0.36	+2.0
2,749,462	-		MPMX20_02614	0.37	+2.3
2,749,569	-		MPMX20_02614	0.44	+0.2
2,749,616	-		MPMX20_02614	0.47	-2.9
2,749,616	-		MPMX20_02614	0.47	-0.2
2,749,651	+		MPMX20_02614	0.49	-0.8
2,749,659	-		MPMX20_02614	0.50	-1.6
2,749,708	+		MPMX20_02614	0.53	+0.7
2,749,785	+		MPMX20_02614	0.58	+1.6
2,749,826	+		MPMX20_02614	0.61	+1.7
2,749,867	+		MPMX20_02614	0.63	-2.8
2,749,867	+		MPMX20_02614	0.63	+1.4
2,749,875	-		MPMX20_02614	0.64	+1.3
2,749,875	-		MPMX20_02614	0.64	-3.7
2,749,875	-		MPMX20_02614	0.64	-1.1
2,749,955	+		MPMX20_02614	0.69	+1.4
2,749,955	+		MPMX20_02614	0.69	-0.5
2,749,963	-		MPMX20_02614	0.69	-3.1
2,750,005	+		MPMX20_02614	0.72	+2.8
2,750,005	+		MPMX20_02614	0.72	-1.4
2,750,062	-		MPMX20_02614	0.76	+0.3
2,750,062	-		MPMX20_02614	0.76	+0.4
2,750,096	+		MPMX20_02614	0.78	+2.4
2,750,104	-		MPMX20_02614	0.79	-0.6
2,750,315	+				+1.3
2,750,321	+				-1.9
2,750,369	+				+0.7
2,750,376	-				-0.1
2,750,376	-				-1.1
2,750,440	+				+1.7
2,750,440	+				-0.9
2,750,440	+				-0.1
2,750,440	+				+0.3
2,750,440	+				-2.3
2,750,440	+				-0.7
2,750,448	-				-2.0
2,750,448	-				-0.3
2,750,448	-				+1.6
2,750,448	-				+2.1
2,750,448	-				-1.8
2,750,556	-				+1.1
2,750,559	+				-0.3
2,750,614	+				-3.4
2,750,658	+				-0.3
2,750,768	-				-1.4
2,750,800	-				-3.3
2,750,800	-				+0.8
2,750,839	-		MPMX20_02615	0.11	+1.8
2,750,839	-		MPMX20_02615	0.11	-1.5
2,750,887	+		MPMX20_02615	0.12	+0.9
2,750,984	+		MPMX20_02615	0.15	-2.1
2,751,003	+		MPMX20_02615	0.15	-0.7
2,751,037	-		MPMX20_02615	0.16	-0.2
2,751,057	+		MPMX20_02615	0.17	-2.3
2,751,057	+		MPMX20_02615	0.17	-1.3
2,751,065	-		MPMX20_02615	0.17	-1.2
2,751,065	-		MPMX20_02615	0.17	-1.7
2,751,088	+		MPMX20_02615	0.18	-0.1
2,751,134	-		MPMX20_02615	0.19	+0.4
2,751,134	-		MPMX20_02615	0.19	+0.1
2,751,166	+		MPMX20_02615	0.20	-1.3
2,751,257	-		MPMX20_02615	0.22	+0.8
2,751,344	-		MPMX20_02615	0.24	-1.1
2,751,371	+		MPMX20_02615	0.25	-2.4
2,751,406	-		MPMX20_02615	0.26	+1.7
2,751,425	+		MPMX20_02615	0.27	-4.2
2,751,475	-		MPMX20_02615	0.28	+1.3
2,751,484	-		MPMX20_02615	0.28	-2.1
2,751,517	-		MPMX20_02615	0.29	-0.2
2,751,543	+		MPMX20_02615	0.30	-2.2
2,751,717	+		MPMX20_02615	0.34	-2.6
2,751,742	-		MPMX20_02615	0.35	-0.1
2,751,836	+		MPMX20_02615	0.38	-1.2
2,751,836	+		MPMX20_02615	0.38	+0.0
2,751,844	-		MPMX20_02615	0.38	+0.7
2,751,846	+		MPMX20_02615	0.38	-2.5
2,751,912	+		MPMX20_02615	0.40	+3.5
2,751,994	+		MPMX20_02615	0.42	-3.0
2,752,031	-		MPMX20_02615	0.43	-0.9
2,752,031	-		MPMX20_02615	0.43	+0.8
2,752,129	-		MPMX20_02615	0.45	-0.1
2,752,179	-		MPMX20_02615	0.47	+0.8
2,752,181	+		MPMX20_02615	0.47	+1.1
2,752,328	-		MPMX20_02615	0.51	-0.8
2,752,500	+		MPMX20_02615	0.55	+0.7
2,752,500	+		MPMX20_02615	0.55	-3.2
2,752,508	-		MPMX20_02615	0.56	-1.9
2,752,508	-		MPMX20_02615	0.56	-2.4
2,752,518	-		MPMX20_02615	0.56	+1.6
2,752,542	-		MPMX20_02615	0.56	-2.3
2,752,567	+		MPMX20_02615	0.57	-1.1
2,752,567	+		MPMX20_02615	0.57	+1.1
2,752,575	-		MPMX20_02615	0.57	-0.6
2,752,647	-		MPMX20_02615	0.59	+1.0
2,752,649	+		MPMX20_02615	0.59	+3.1
2,752,652	-		MPMX20_02615	0.59	-2.6
2,752,657	-		MPMX20_02615	0.60	+0.2
2,752,657	-		MPMX20_02615	0.60	+1.0
2,752,657	-		MPMX20_02615	0.60	-2.1
2,752,657	-		MPMX20_02615	0.60	-0.9
2,752,735	-		MPMX20_02615	0.62	-2.7
2,752,737	+		MPMX20_02615	0.62	+2.1
2,752,848	+		MPMX20_02615	0.65	+0.3
2,752,933	+		MPMX20_02615	0.67	-1.6
2,752,949	+		MPMX20_02615	0.67	+3.5
2,752,957	-		MPMX20_02615	0.68	-1.8
2,752,975	+		MPMX20_02615	0.68	+1.1
2,752,998	-		MPMX20_02615	0.69	+0.2
2,753,012	+		MPMX20_02615	0.69	-0.3
2,753,027	+		MPMX20_02615	0.69	+0.5
2,753,106	+		MPMX20_02615	0.72	+1.5
2,753,139	+		MPMX20_02615	0.72	-2.8
2,753,139	+		MPMX20_02615	0.72	+1.7
2,753,147	-		MPMX20_02615	0.73	+2.0
2,753,189	+		MPMX20_02615	0.74	+0.1
2,753,189	+		MPMX20_02615	0.74	-3.6
2,753,237	-		MPMX20_02615	0.75	-4.9
2,753,263	+		MPMX20_02615	0.76	+1.4
2,753,274	+		MPMX20_02615	0.76	+0.7
2,753,274	+		MPMX20_02615	0.76	-3.9
2,753,300	-		MPMX20_02615	0.77	-3.3
2,753,371	+		MPMX20_02615	0.79	+3.2
2,753,387	+		MPMX20_02615	0.79	-1.3
2,753,395	-		MPMX20_02615	0.79	+1.7
2,753,400	-		MPMX20_02615	0.79	-0.3
2,753,400	-		MPMX20_02615	0.79	-2.1
2,753,403	+		MPMX20_02615	0.79	+2.8
2,753,445	-		MPMX20_02615	0.81	-0.7
2,753,472	+		MPMX20_02615	0.81	+0.4
2,753,474	+		MPMX20_02615	0.81	+0.1
2,753,474	+		MPMX20_02615	0.81	-0.6
2,753,600	+		MPMX20_02615	0.85	-2.3
2,753,703	-		MPMX20_02615	0.87	+0.8
2,753,729	-		MPMX20_02615	0.88	-4.6
2,753,729	-		MPMX20_02615	0.88	-2.9
2,753,785	+		MPMX20_02615	0.90	-0.3
2,753,850	+				-0.6
2,753,860	+				+0.7
2,753,865	+				-0.6
2,753,872	+				-1.6
2,753,885	-				+0.8
2,753,885	-				-0.3
2,753,904	-				+2.4
2,753,998	+				+0.4
2,754,003	+				+0.1
2,754,006	-				-1.8
2,754,016	-				-3.3
2,754,088	+				-1.0
2,754,096	+				+0.2
2,754,135	+				-0.9
2,754,143	-				+1.2
2,754,174	+				+1.8
2,754,182	-				-3.7
2,754,182	-				+0.7
2,754,184	+				+1.0
2,754,200	+				-1.7
2,754,232	+				-1.4
2,754,239	+				-3.3
2,754,291	-				-0.6
2,754,291	-				+1.2
2,754,302	-				-2.3
2,754,424	-				+0.8
2,754,451	+				+2.3
2,754,451	+				+0.5
2,754,459	-				+1.6
2,754,577	+				-3.6
2,754,577	+				-3.6
2,754,577	+				+1.4
2,754,577	+				-3.1
2,754,577	+				-3.4
2,754,585	-				-0.0
2,754,607	+				-0.8
2,754,660	+				+1.8
2,754,660	+				+2.6
2,754,660	+				+1.2
2,754,660	+				-0.3
2,754,661	+				+0.9
2,754,668	-				-4.0
2,754,668	-				-1.8
2,754,668	-				+0.4
2,754,668	-				-0.0
2,754,668	-				+2.2
2,754,674	-				+1.3
2,754,799	-		MPMX20_02616	0.18	+1.8
2,754,856	+		MPMX20_02616	0.22	+1.7
2,754,859	-		MPMX20_02616	0.22	+0.8
2,754,864	-		MPMX20_02616	0.22	+2.6
2,754,864	-		MPMX20_02616	0.22	-4.2
2,754,916	+		MPMX20_02616	0.26	-1.1
2,754,916	+		MPMX20_02616	0.26	+1.1
2,754,925	-		MPMX20_02616	0.27	-3.7
2,755,039	+		MPMX20_02616	0.35	+1.9
2,755,067	-		MPMX20_02616	0.37	+1.9
2,755,091	+		MPMX20_02616	0.38	+0.6
2,755,099	-		MPMX20_02616	0.39	-0.7
2,755,103	+		MPMX20_02616	0.39	+1.2
2,755,111	-		MPMX20_02616	0.40	+0.7
2,755,111	-		MPMX20_02616	0.40	-0.1
2,755,154	-		MPMX20_02616	0.43	+1.9
2,755,154	-		MPMX20_02616	0.43	-4.5