Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02427

Experiment: AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001
2,564,071	+		MPMX20_02425	0.77	-1.1
2,564,178	-		MPMX20_02425	0.84	+1.2
2,564,197	+		MPMX20_02425	0.86	+1.5
2,564,204	+		MPMX20_02425	0.86	-1.3
2,564,205	-		MPMX20_02425	0.86	-3.7
2,564,244	-		MPMX20_02425	0.89	-3.7
2,564,316	-				-2.3
2,564,331	-				-2.7
2,564,344	+				+0.6
2,564,421	+				-4.4
2,564,421	+				-2.5
2,564,421	+				+1.9
2,564,432	-				+2.8
2,564,459	+				-0.4
2,564,467	-				-0.9
2,564,467	-				-1.0
2,564,500	-		MPMX20_02426	0.10	+2.2
2,564,508	-		MPMX20_02426	0.14	+1.7
2,564,518	-		MPMX20_02426	0.20	-2.1
2,564,534	-		MPMX20_02426	0.28	-2.5
2,564,600	+		MPMX20_02426	0.63	+3.0
2,564,600	+		MPMX20_02426	0.63	+0.2
2,564,608	-		MPMX20_02426	0.67	-1.1
2,564,609	-		MPMX20_02426	0.68	+0.6
2,564,614	+		MPMX20_02426	0.70	+0.6
2,564,627	+		MPMX20_02426	0.77	-3.6
2,564,629	+		MPMX20_02426	0.78	-0.5
2,564,629	+		MPMX20_02426	0.78	-1.7
2,564,637	-		MPMX20_02426	0.83	+1.2
2,564,637	-		MPMX20_02426	0.83	-0.5
2,564,641	+		MPMX20_02426	0.85	+1.8
2,564,727	-				+0.0
2,564,729	-				+1.4
2,564,781	+				+2.1
2,564,783	-				+1.4
2,564,844	-				+2.2
2,564,951	-				+3.8
2,565,035	-				+0.2
2,565,049	+				+0.7
2,565,058	-				+0.8
2,565,058	-				+1.3
2,565,058	-				+1.3
2,565,066	+				+1.3
2,565,080	+				+1.4
2,565,112	+				+1.2
2,565,164	+				-1.6
2,565,172	+				+1.3
2,565,172	-				-3.1
2,565,174	+				+1.6
2,565,282	+		MPMX20_02427	0.16	-0.5
2,565,282	+		MPMX20_02427	0.16	+1.2
2,565,282	+		MPMX20_02427	0.16	+1.3
2,565,282	+		MPMX20_02427	0.16	+1.1
2,565,282	+		MPMX20_02427	0.16	+1.7
2,565,290	-		MPMX20_02427	0.16	+2.6
2,565,290	-		MPMX20_02427	0.16	+0.0
2,565,290	-		MPMX20_02427	0.16	+0.7
2,565,290	-		MPMX20_02427	0.16	+2.8
2,565,297	+		MPMX20_02427	0.17	-2.5
2,565,297	-		MPMX20_02427	0.17	+1.6
2,565,346	-		MPMX20_02427	0.20	-0.5
2,565,352	+		MPMX20_02427	0.21	-3.6
2,565,360	-		MPMX20_02427	0.21	+2.5
2,565,367	-		MPMX20_02427	0.22	-2.5
2,565,404	+		MPMX20_02427	0.24	+1.6
2,565,404	+		MPMX20_02427	0.24	+3.1
2,565,404	+		MPMX20_02427	0.24	-0.1
2,565,404	+		MPMX20_02427	0.24	-2.0
2,565,404	+		MPMX20_02427	0.24	+1.1
2,565,412	-		MPMX20_02427	0.25	+0.4
2,565,447	-		MPMX20_02427	0.27	-3.9
2,565,447	-		MPMX20_02427	0.27	+0.9
2,565,466	-		MPMX20_02427	0.29	-2.7
2,565,466	-		MPMX20_02427	0.29	-0.3
2,565,487	-		MPMX20_02427	0.30	+2.4
2,565,523	-		MPMX20_02427	0.33	-3.6
2,565,523	-		MPMX20_02427	0.33	+3.4
2,565,529	+		MPMX20_02427	0.33	-0.8
2,565,529	+		MPMX20_02427	0.33	-2.1
2,565,537	-		MPMX20_02427	0.34	-1.7
2,565,583	-		MPMX20_02427	0.37	-3.8
2,565,588	+		MPMX20_02427	0.37	-0.9
2,565,594	-		MPMX20_02427	0.38	+1.1
2,565,703	+		MPMX20_02427	0.46	+0.4
2,565,804	+		MPMX20_02427	0.53	-1.1
2,565,807	+		MPMX20_02427	0.53	-2.9
2,565,851	-		MPMX20_02427	0.56	-3.4
2,565,877	+		MPMX20_02427	0.58	-1.3
2,565,944	+		MPMX20_02427	0.63	+1.0
2,565,944	+		MPMX20_02427	0.63	-0.9
2,565,944	+		MPMX20_02427	0.63	-1.4
2,565,957	+		MPMX20_02427	0.64	+0.9
2,566,077	+		MPMX20_02427	0.72	-0.2
2,566,155	+		MPMX20_02427	0.78	+1.1
2,566,163	-		MPMX20_02427	0.78	-0.6
2,566,194	+		MPMX20_02427	0.81	-3.1
2,566,199	+		MPMX20_02427	0.81	-1.3
2,566,207	-		MPMX20_02427	0.82	-0.0
2,566,207	-		MPMX20_02427	0.82	-1.1
2,566,312	+		MPMX20_02427	0.89	+2.2
2,566,312	+		MPMX20_02427	0.89	-3.1
2,566,312	+		MPMX20_02427	0.89	-0.5
2,566,320	-		MPMX20_02427	0.90	-1.0
2,566,336	+				+3.1
2,566,336	+				+2.5
2,566,336	+				-3.5
2,566,336	+				+0.4
2,566,343	+				+1.8
2,566,343	+				-0.3
2,566,343	+				+0.6
2,566,344	-				-0.8
2,566,344	-				+1.3
2,566,467	-				+0.4
2,566,476	-				-0.6
2,566,517	+				-2.2
2,566,517	+				+2.0
2,566,525	-				-1.9
2,566,525	-				-3.7
2,566,525	-				+1.6
2,566,537	+				+0.6
2,566,537	+				-2.6
2,566,537	+				-3.1
2,566,545	-				+0.5
2,566,545	-				+3.5
2,566,562	+				-1.7
2,566,570	-		MPMX20_02428	0.10	-0.2
2,566,573	+		MPMX20_02428	0.11	-0.4
2,566,609	+		MPMX20_02428	0.14	-3.2
2,566,609	+		MPMX20_02428	0.14	+0.3
2,566,617	-		MPMX20_02428	0.15	-0.3
2,566,619	+		MPMX20_02428	0.15	-3.2
2,566,627	-		MPMX20_02428	0.16	-1.0
2,566,662	+		MPMX20_02428	0.20	+1.8
2,566,662	+		MPMX20_02428	0.20	-3.1
2,566,690	+		MPMX20_02428	0.22	-1.1
2,566,709	+		MPMX20_02428	0.24	+0.1
2,566,726	+		MPMX20_02428	0.26	+1.5
2,566,726	+		MPMX20_02428	0.26	+1.1
2,566,726	+		MPMX20_02428	0.26	-0.3
2,566,726	+		MPMX20_02428	0.26	-0.6
2,566,726	+		MPMX20_02428	0.26	-1.6
2,566,734	-		MPMX20_02428	0.27	-1.5
2,566,734	-		MPMX20_02428	0.27	+1.0
2,566,734	-		MPMX20_02428	0.27	+0.9
2,566,811	-		MPMX20_02428	0.34	-2.7
2,566,828	+		MPMX20_02428	0.36	-0.3
2,566,843	+		MPMX20_02428	0.37	-2.3
2,566,843	+		MPMX20_02428	0.37	-0.2
2,566,843	+		MPMX20_02428	0.37	+1.9
2,566,851	-		MPMX20_02428	0.38	-2.4
2,566,851	-		MPMX20_02428	0.38	+2.2
2,566,851	-		MPMX20_02428	0.38	+3.6
2,566,851	-		MPMX20_02428	0.38	+0.6
2,566,851	-		MPMX20_02428	0.38	-3.5
2,566,851	-		MPMX20_02428	0.38	+0.7
2,566,851	-		MPMX20_02428	0.38	-0.9
2,566,853	+		MPMX20_02428	0.38	+0.1
2,566,861	-		MPMX20_02428	0.39	-1.9
2,566,861	-		MPMX20_02428	0.39	+1.6
2,566,861	-		MPMX20_02428	0.39	-0.4
2,566,872	+		MPMX20_02428	0.40	-2.5
2,566,909	-		MPMX20_02428	0.44	+1.0
2,566,944	-		MPMX20_02428	0.47	+3.8
2,566,944	-		MPMX20_02428	0.47	-2.6
2,566,944	-		MPMX20_02428	0.47	-1.3
2,566,946	+		MPMX20_02428	0.48	-3.1
2,566,959	+		MPMX20_02428	0.49	+1.7
2,566,967	-		MPMX20_02428	0.50	+3.1
2,566,968	-		MPMX20_02428	0.50	+0.9
2,566,970	+		MPMX20_02428	0.50	+0.2
2,567,045	+		MPMX20_02428	0.57	-3.0
2,567,117	+		MPMX20_02428	0.65	-2.9
2,567,142	-		MPMX20_02428	0.67	-2.7
2,567,142	-		MPMX20_02428	0.67	-1.6
2,567,142	-		MPMX20_02428	0.67	+2.6
2,567,184	+		MPMX20_02428	0.71	+2.2
2,567,188	+		MPMX20_02428	0.72	+0.8
2,567,188	+		MPMX20_02428	0.72	-1.3
2,567,196	-		MPMX20_02428	0.72	-1.0
2,567,238	-		MPMX20_02428	0.77	-2.3
2,567,284	+		MPMX20_02428	0.81	-0.4
2,567,284	+		MPMX20_02428	0.81	+2.4
2,567,294	-		MPMX20_02428	0.82	-1.5
2,567,351	+		MPMX20_02428	0.88	+0.3
2,567,373	-		MPMX20_02428	0.90	-3.3
2,567,408	+				-2.1
2,567,408	+				+1.5
2,567,416	-				+0.3
2,567,416	-				-2.5
2,567,416	-				+0.3
2,567,416	-				+0.4
2,567,416	-				+1.1
2,567,416	-				-4.3
2,567,416	-				-1.4
2,567,425	-				-2.4
2,567,448	+				+1.8
2,567,453	+				-4.3
2,567,453	+				+2.2
2,567,463	+				-1.2