Experiment: AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00195 and MPMX20_00196 are separated by 339 nucleotides MPMX20_00196 and MPMX20_00197 are separated by 8 nucleotides MPMX20_00197 and MPMX20_00198 are separated by 116 nucleotides MPMX20_00198 and MPMX20_00199 are separated by 6 nucleotides MPMX20_00199 and MPMX20_00200 are separated by 118 nucleotides
MPMX20_00195: MPMX20_00195 - Pantothenate kinase, at 204,133 to 205,059
_00195
MPMX20_00196: MPMX20_00196 - tRNA-Thr, at 205,399 to 205,474
_00196
MPMX20_00197: MPMX20_00197 - tRNA-Tyr, at 205,483 to 205,567
_00197
MPMX20_00198: MPMX20_00198 - tRNA-Gly, at 205,684 to 205,758
_00198
MPMX20_00199: MPMX20_00199 - tRNA-Thr, at 205,765 to 205,840
_00199
MPMX20_00200: MPMX20_00200 - Elongation factor Tu 1, at 205,959 to 207,143
_00200
Position (kb) 205
206 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 205.099 kb on + strand at 205.104 kb on + strand at 205.104 kb on + strand at 205.104 kb on + strand at 205.104 kb on + strand at 205.104 kb on + strand at 205.104 kb on + strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.112 kb on - strand at 205.146 kb on - strand at 205.164 kb on + strand at 205.166 kb on - strand at 205.233 kb on + strand at 205.240 kb on - strand at 205.288 kb on + strand at 205.298 kb on + strand at 205.500 kb on + strand, within MPMX20_00197 at 205.500 kb on + strand, within MPMX20_00197 at 205.500 kb on + strand, within MPMX20_00197 at 205.578 kb on + strand at 205.578 kb on + strand at 205.615 kb on + strand at 205.664 kb on + strand at 205.782 kb on - strand, within MPMX20_00199 at 205.876 kb on - strand at 206.046 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 remove 205,099 + -1.8 205,104 + +0.5 205,104 + -2.7 205,104 + -0.5 205,104 + -0.6 205,104 + +1.9 205,104 + -0.4 205,112 - -0.4 205,112 - -2.7 205,112 - +2.3 205,112 - -1.5 205,112 - -1.6 205,112 - -1.7 205,112 - -2.0 205,112 - +1.0 205,112 - -0.8 205,112 - +3.0 205,112 - +0.1 205,112 - -0.4 205,112 - +0.5 205,112 - +2.9 205,112 - +2.3 205,112 - +1.0 205,146 - +1.7 205,164 + +0.5 205,166 - -0.9 205,233 + -0.6 205,240 - -0.5 205,288 + -1.8 205,298 + +1.1 205,500 + MPMX20_00197 0.20 -1.2 205,500 + MPMX20_00197 0.20 +0.2 205,500 + MPMX20_00197 0.20 -2.7 205,578 + -4.4 205,578 + +1.2 205,615 + -2.2 205,664 + -1.5 205,782 - MPMX20_00199 0.22 -1.9 205,876 - +3.3 206,046 + -1.2
Or see this region's nucleotide sequence