Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS03530

Experiment: Mucin from porcine stomach type II 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mucin from porcine stomach type II 2.5 mg/ml (C)
256,771	+				-1.2
256,993	+				-0.2
257,184	+				-0.2
257,517	-		HMPREF1058_RS03530	0.17	+1.2
257,885	-		HMPREF1058_RS03530	0.30	-0.2
259,895	-				-1.6
259,899	-				-0.1
259,899	-				+0.7
259,910	+				+1.0
259,911	-				+0.6
259,912	+				-0.2
259,930	-				+1.1
260,810	-				+0.4
260,822	-				+1.2
260,830	-				-0.5
260,830	-				-0.2
260,866	-				+0.8