Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS13635

Experiment: pectate 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pectate 2.5 mg/ml (C)
1,413,432	+		HMPREF1058_RS13640	0.50	-0.4
1,413,432	+		HMPREF1058_RS13640	0.50	-0.5
1,413,440	+		HMPREF1058_RS13640	0.51	-1.7
1,413,444	+		HMPREF1058_RS13640	0.51	-0.2
1,413,444	+		HMPREF1058_RS13640	0.51	-1.0
1,413,444	+		HMPREF1058_RS13640	0.51	-0.4
1,413,496	+		HMPREF1058_RS13640	0.55	-0.6
1,413,538	+		HMPREF1058_RS13640	0.57	-1.1
1,413,545	+		HMPREF1058_RS13640	0.58	+0.6
1,413,545	+		HMPREF1058_RS13640	0.58	+0.3
1,413,610	+		HMPREF1058_RS13640	0.62	-1.4
1,413,763	+		HMPREF1058_RS13640	0.72	+0.9
1,413,796	+		HMPREF1058_RS13640	0.74	-0.2
1,413,829	+		HMPREF1058_RS13640	0.77	+0.1
1,414,284	-		HMPREF1058_RS13635	0.28	-1.3
1,414,368	+		HMPREF1058_RS13635	0.45	+0.0
1,414,409	+		HMPREF1058_RS13635	0.53	-2.7
1,414,436	-		HMPREF1058_RS13635	0.58	-2.2
1,414,436	-		HMPREF1058_RS13635	0.58	-0.7
1,414,524	-		HMPREF1058_RS13635	0.76	-3.3
1,414,524	-		HMPREF1058_RS13635	0.76	-0.5
1,414,572	-		HMPREF1058_RS13635	0.86	-1.4
1,414,609	+				-0.1