Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS03970

Experiment: Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C)
147,524	+				-0.9
148,192	-		HMPREF1058_RS03975	0.69	-0.1
148,218	-				-0.6
148,477	-				-1.9
148,606	-		HMPREF1058_RS03970	0.19	-1.5
148,606	-		HMPREF1058_RS03970	0.19	-0.6
148,624	+		HMPREF1058_RS03970	0.21	-1.0
148,629	-		HMPREF1058_RS03970	0.22	+0.4
148,666	+		HMPREF1058_RS03970	0.26	-0.3
148,667	-		HMPREF1058_RS03970	0.26	-1.5
148,688	+		HMPREF1058_RS03970	0.29	+0.4
148,753	+				-0.6
148,753	+		HMPREF1058_RS03970	0.37	-0.9
149,093	+				+0.4
149,279	-				-0.3
149,299	+				+0.0
149,320	-				-0.1
149,797	-				-1.2
149,919	+				-1.7