Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS16350

Experiment: Galactan from Potato 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato 2.5 mg/ml (C)
692,046	-				+0.4
692,118	+				-2.5
692,133	+				-0.4
692,828	+		HMPREF1058_RS16350	0.84	+0.1
692,869	-		HMPREF1058_RS16350	0.89	+0.4
692,869	-		HMPREF1058_RS16350	0.89	+1.1
692,871	-		HMPREF1058_RS16350	0.89	-0.0
692,871	-		HMPREF1058_RS16350	0.89	+1.6
693,714	+				-1.3
693,745	+				-0.3
693,819	+				-0.8
693,842	+				-0.6
693,852	+				+0.8
693,852	+				-2.6
693,958	+				+0.3
693,966	-				-1.6
693,969	+				-0.1
693,969	+				+0.7
693,970	-				+0.5