Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS14065

Experiment: Galactan from Potato 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato 2.5 mg/ml (C)
1,292,691	+				+0.7
1,292,691	+				+1.8
1,292,694	+				-0.3
1,292,694	+				-0.1
1,293,486	+				-2.9
1,293,687	+		HMPREF1058_RS14065	0.18	+2.5
1,293,775	+		HMPREF1058_RS14065	0.25	-0.1
1,293,775	+		HMPREF1058_RS14065	0.25	+0.2
1,293,776	-		HMPREF1058_RS14065	0.25	+1.1
1,293,776	-		HMPREF1058_RS14065	0.25	+0.2
1,293,779	+		HMPREF1058_RS14065	0.25	+0.8
1,293,779	+		HMPREF1058_RS14065	0.25	+0.4
1,293,811	+		HMPREF1058_RS14065	0.27	-0.5
1,293,812	-		HMPREF1058_RS14065	0.28	+0.3
1,293,836	-		HMPREF1058_RS14065	0.29	-0.5
1,293,841	+		HMPREF1058_RS14065	0.30	+1.2
1,293,866	+		HMPREF1058_RS14065	0.32	+0.6
1,293,867	-		HMPREF1058_RS14065	0.32	+0.1
1,293,964	+		HMPREF1058_RS14065	0.40	+1.5
1,293,965	-		HMPREF1058_RS14065	0.40	-0.6
1,293,965	-		HMPREF1058_RS14065	0.40	+0.3
1,293,986	+		HMPREF1058_RS14065	0.41	+0.9
1,294,073	+		HMPREF1058_RS14065	0.48	+0.4
1,294,083	-		HMPREF1058_RS14065	0.49	-0.6
1,294,083	-		HMPREF1058_RS14065	0.49	+0.5
1,294,113	-		HMPREF1058_RS14065	0.51	+0.9
1,294,190	+		HMPREF1058_RS14065	0.57	+1.3
1,294,190	+		HMPREF1058_RS14065	0.57	+2.6
1,294,191	-		HMPREF1058_RS14065	0.58	+1.5
1,294,241	+		HMPREF1058_RS14065	0.62	+1.2
1,294,253	+		HMPREF1058_RS14065	0.62	+0.7
1,294,253	+		HMPREF1058_RS14065	0.62	+2.2
1,294,338	+		HMPREF1058_RS14065	0.69	+2.2
1,294,356	+		HMPREF1058_RS14065	0.71	+1.7
1,294,371	+		HMPREF1058_RS14065	0.72	+2.7
1,294,372	-		HMPREF1058_RS14065	0.72	-0.2
1,294,401	-		HMPREF1058_RS14065	0.74	+0.2
1,294,411	+		HMPREF1058_RS14065	0.75	+0.8
1,294,503	-		HMPREF1058_RS14065	0.82	-0.1
1,294,662	+				+0.3
1,294,671	+				+1.2
1,294,678	+				+0.7
1,294,691	-				+0.6
1,294,746	+				+1.0
1,294,769	+				+0.5
1,294,807	+				+0.9