Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS08615

Experiment: Galactan from Potato 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato 2.5 mg/ml (C)
1,088,633	-				-1.7
1,089,668	-				-0.0
1,089,899	-		HMPREF1058_RS08615	0.26	+1.0
1,089,935	-		HMPREF1058_RS08615	0.29	+0.9
1,090,061	-		HMPREF1058_RS08615	0.41	+1.0
1,090,107	-		HMPREF1058_RS08615	0.45	-1.0
1,090,107	-		HMPREF1058_RS08615	0.45	+1.7
1,090,205	-		HMPREF1058_RS08615	0.54	+0.5
1,090,274	-		HMPREF1058_RS08615	0.60	-0.2
1,090,373	-		HMPREF1058_RS08615	0.70	+1.2
1,090,373	-		HMPREF1058_RS08615	0.70	+1.1
1,090,408	-		HMPREF1058_RS08615	0.73	+0.5
1,090,457	-		HMPREF1058_RS08615	0.77	+1.1
1,090,457	-		HMPREF1058_RS08615	0.77	+0.4
1,090,563	-		HMPREF1058_RS08615	0.87	+0.6
1,090,601	-				+0.0
1,090,686	-				+1.2
1,090,686	-				-0.0
1,090,713	-				+0.1
1,090,713	-				-1.7
1,091,359	-				+0.6
1,091,359	-				+2.7
1,091,359	-				+2.2
1,091,372	-				-0.9
1,091,416	+				-0.4
1,091,417	-				-2.7
1,091,434	-				+0.4
1,091,558	-				-0.6
1,091,569	+				+0.3