Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS06045

Experiment: Galactan from Potato 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Galactan from Potato 2.5 mg/ml (C)
16,852	-				-0.9
16,899	-				+2.8
16,899	-				+2.8
17,128	-		HMPREF1058_RS06045	0.35	-0.5
17,158	-		HMPREF1058_RS06045	0.42	+0.2
17,158	-		HMPREF1058_RS06045	0.42	+0.8
17,163	+		HMPREF1058_RS06045	0.43	+0.6
17,164	-		HMPREF1058_RS06045	0.43	+1.2
17,217	-		HMPREF1058_RS06045	0.55	+0.1
17,268	+		HMPREF1058_RS06045	0.67	+0.9
17,275	-		HMPREF1058_RS06045	0.68	+1.8
17,364	+		HMPREF1058_RS06045	0.89	+1.3
17,364	+		HMPREF1058_RS06045	0.89	+0.7
17,365	-		HMPREF1058_RS06045	0.89	+1.3
17,368	+		HMPREF1058_RS06045	0.90	+1.3
17,472	+				+0.4
17,473	-				+0.5
17,473	-				-0.4
17,474	+				+1.1
17,475	-				+0.7
17,567	+				+0.1
17,568	-				-0.7
17,609	+				-0.3
17,636	+				+1.3
17,636	+				-0.6
17,819	+		HMPREF1058_RS06040	0.11	-0.2
18,096	+		HMPREF1058_RS06040	0.29	+0.5
18,132	+		HMPREF1058_RS06040	0.31	+0.5
18,132	+		HMPREF1058_RS06040	0.31	+0.1
18,141	+		HMPREF1058_RS06040	0.32	-0.9
18,297	+		HMPREF1058_RS06040	0.42	-0.2