Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS00970

Experiment: Galactan from Potato 2.5 mg/ml (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

No fitness data for strains within 15,045 to 18,460
download SVG
500 ntHMPREF1058_RS00980 and HMPREF1058_RS00975 are separated by 80 nucleotidesHMPREF1058_RS00975 and HMPREF1058_RS00970 are separated by 37 nucleotidesHMPREF1058_RS00970 and HMPREF1058_RS00965 are separated by 12 nucleotides HMPREF1058_RS00980: HMPREF1058_RS00980 - response regulator, at 11,326 to 15,612 _RS00980 HMPREF1058_RS00975: HMPREF1058_RS00975 - L-rhamnose mutarotase, at 15,693 to 16,007 _RS00975 HMPREF1058_RS00970: HMPREF1058_RS00970 - glycoside hydrolase family 88 protein, at 16,045 to 17,460 _RS00970 HMPREF1058_RS00965: HMPREF1058_RS00965 - rhamnogalacturonan lyase, at 17,473 to 19,380 _RS00965