Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS18235

Experiment: Xylan from corn core 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from corn core 2.5 mg/ml (C)
226,325	+				-0.9
226,327	+				-0.9
226,327	+				-0.4
226,327	+				+0.1
226,329	+				+0.0
226,332	+				+1.5
226,403	+				+0.8
226,405	+				+1.9
226,429	+		HMPREF1058_RS18235	0.11	+1.2
226,429	+		HMPREF1058_RS18235	0.11	+0.7
226,429	+		HMPREF1058_RS18235	0.11	+1.0
226,481	+		HMPREF1058_RS18235	0.18	+0.9
226,499	+		HMPREF1058_RS18235	0.20	+0.9
226,827	+		HMPREF1058_RS18235	0.62	+1.0
226,834	+		HMPREF1058_RS18235	0.63	+1.5