Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS14050

Experiment: Xylan from corn core 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from corn core 2.5 mg/ml (C)
1,297,531	-				-0.1
1,297,693	-		HMPREF1058_RS14050	0.13	+0.3
1,297,783	-		HMPREF1058_RS14050	0.22	+1.2
1,297,783	-		HMPREF1058_RS14050	0.22	+0.0
1,297,907	-		HMPREF1058_RS14050	0.35	+0.6
1,297,911	-		HMPREF1058_RS14050	0.35	-0.0
1,297,911	-		HMPREF1058_RS14050	0.35	-0.1
1,297,911	-		HMPREF1058_RS14050	0.35	-0.4
1,297,911	-		HMPREF1058_RS14050	0.35	+0.6
1,297,911	-		HMPREF1058_RS14050	0.35	+0.5
1,297,968	-		HMPREF1058_RS14050	0.41	+1.3
1,297,970	-		HMPREF1058_RS14050	0.41	+0.8
1,297,974	-		HMPREF1058_RS14050	0.42	+1.0
1,298,102	-		HMPREF1058_RS14050	0.55	-0.6
1,298,104	-		HMPREF1058_RS14050	0.55	+1.2
1,298,123	-		HMPREF1058_RS14050	0.57	+0.2
1,298,264	-		HMPREF1058_RS14050	0.72	+0.7
1,298,330	-		HMPREF1058_RS14050	0.78	+1.0
1,298,400	-		HMPREF1058_RS14050	0.86	-1.7
1,298,522	-				-1.0
1,298,527	-				+2.0