Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34985

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,447,745	-		BPHYT_RS34980	0.56	-0.7
3,448,021	-		BPHYT_RS34980	0.75	-0.2
3,448,031	+		BPHYT_RS34980	0.75	-0.4
3,448,189	-		BPHYT_RS34980	0.86	-0.7
3,448,335	+				+0.3
3,448,395	+				-0.2
3,448,854	-		BPHYT_RS34985	0.45	-1.1
3,449,113	+		BPHYT_RS34985	0.71	-0.2
3,449,113	+		BPHYT_RS34985	0.71	-0.3
3,449,553	+		BPHYT_RS34990	0.14	+0.0
3,449,554	-		BPHYT_RS34990	0.14	+0.4